Natrinema pallidum: FGF80_01395
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Entry
FGF80_01395 CDS
T06072
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npl03016
]
FGF80_01395 (endA)
Enzymes [BR:
npl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FGF80_01395 (endA)
Transfer RNA biogenesis [BR:
npl03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FGF80_01395 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QCW01973
UniProt:
A0A4P9TBG5
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All DBs
Position
complement(300756..301832)
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AA seq
358 aa
AA seq
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MSLEGRFDVDDGVVRVGGDARQRYHDSRGYGYPLEGNEIALAPVEAAHLLYRGDLETVVN
TASGDRLGFRAFIAREPGDDFGVRFLVYADLRSRGFYLSPASEPWVSDPPGGEADFAVFP
RGKGPGDGEIAYALRIIGERTDIPAAELREGVLAVVDEESEITYFEVDSRDPTGTSDADA
SLPEGCAADLLADRVVVWEPPLGLYERTFYGQPLEGREYDEPTLQCSLLEAAYLAERGAI
DLEPGTVRERGREVEGERFDRRLSVYTALRERGVVPKTGYKFGADFRTYADVESVENLGH
SELLVRVHPADYVFEPRDLALDVRLAHGVRKTMVFALVADGAEGTNGIEWWSLERLTP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagggacggttcgacgtggacgacggagtcgtccgcgtcggcggcgacgca
cgccagcgatatcacgactcgcggggatacggctatccgctcgaggggaacgaaatcgcg
cttgcacccgtggaagcggcccacctgctctatcggggggacctcgagacggtcgtgaat
accgcgagcggcgaccgactcggattcagagcgttcatcgcccgcgagcccggcgacgat
ttcggcgttcggtttctcgtctacgcggacctgcgatcgcgcggcttctatctttccccc
gcgtcggagccgtgggtgtccgatccgcccggcggcgaagccgatttcgcggtgttcccg
cgagggaagggacccggtgacggcgaaatcgcctacgccttgcggatcatcggcgagcga
acggatattcccgccgccgaactccgggaaggcgtgctggccgtcgtcgacgaggagagc
gagataacctacttcgaggtcgacagtcgtgacccgaccggtacgtcggacgccgacgcg
tcgctgccggagggctgtgcggccgacctgctcgccgaccgggtcgtggtctgggagccg
ccgctcggcctctacgagcgaacgttctacggccagccgctcgagggccgggagtacgac
gagccgacgctacagtgctccctgctcgaggcggcctacctcgccgaacggggtgcgatc
gatctcgagccggggacggtccgcgagcgcggccgcgaggtcgagggtgagcggttcgac
cggcggctgagcgtctacacggcgcttcgggagcgtggcgtggtccccaagacggggtac
aagttcggtgcggacttccggacctatgcggacgtggaatccgtcgagaacctcggccac
tccgaattgctcgttcgcgtccatccggccgactacgtcttcgaaccgcgggatctggcg
cttgacgtgcggctcgcccacggcgtccggaaaacgatggtgttcgcgctggtggccgac
ggggccgaggggacgaacggaatcgagtggtggtcgctcgagcggctgacgccctga
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