Natrinema pallidum: FGF80_01945
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Entry
FGF80_01945 CDS
T06072
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npl03000
]
FGF80_01945
Transcription factors [BR:
npl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FGF80_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
GAF_2
PAS
BAT
PAS_9
HTH_10
GAF
GAF_3
PAS_8
PAS_3
Sigma70_r4
FUSC
Motif
Other DBs
NCBI-ProteinID:
QCW02075
UniProt:
A0A4P9TDB0
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All DBs
Position
412522..415680
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AA seq
1052 aa
AA seq
DB search
MTCGLEDGETTPVRVLPVGSSEWIRGATAGLADESVTVMDSVPAPAALAADRLDDVDCVL
TDDRDVLGIVDEASPVVYAAEPARTESIDDLRGDPEVIAKTTIQEPAILDRRLRRAVEFA
AIQRSATRQAEWYQTLIEQSSDLLLVVNTDGEITYTSPSVERVGGFETDELCGNDILEHV
HPDDSQSVADEFEAIRAADCGTTRTIDYTCQHSDGYWYVHEAVLTNRLDDGIVDGIVASI
RDITEHHRIEQELDESFKRVTDAFYALDGDWRFTYVNDRALEHLEFTRSDLLGRRILDVF
PELEGTVFQREALEAMEHQERRTFEGYLERCESWIEARLYPSPAGLSVYWQDVTERVERE
RDLTERTERLQTLVENAPVVLFVLDDEGTFTLSEGRGLTNLGFDSTDIVGQSFTDLLAEY
PDACADIRAALEGEAVHSQRPLGDRVFEAWYRPITDDDGAVDRVLGVANDVTERVQYQET
LNALHEATSHLLSVDSKAAACEYIVDVATDVLGLDSVVYRYDDQHNELAAEARSPTLEPA
LDPPSRLRPDESVAWEAFVTGEPAVYDDITDKNNVYDETTAARSGLYVPLGEHGVLVALS
TAASEYDEDTVELVQSFAATAEAALDRIGRTRRLHDREHELKQQNRHLERLNAANEARQE
IEQHLLLADSRAEIERGVPERLADLESCSLAWIGEPDPSGNELRSRSCAGSDRGYLDAVA
VTTVAESAAEPTGRAARTRDPVYVDNVAESIHDGEWRGKALSRNFQSAYAVPLVYDGFLY
GVLSIYGEERNAFDETLRSMLAELGETVAYAIDAVKRKNALVGDDHTEVELEIAADATLC
RLADALDDALTYEGATRRADGSQIVFVAVEDPADDPAATVDRSAIDGVAAVSTIAEHEDE
MLLQVRLTEPFLGSIVDTHGARLRELGAAPSGGRAIIDVPETAEVRDVLSGISRSGPAVS
LIARREESTANRSTLGGPARSTLLEQLTDRQHEVVQTAYHGGFFEWPRRANGEEIASSLD
ISSPAFHKHVRSAERKLFAALFEGSTTTGLTD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcggtctcgaggacggtgagacgaccccggtccgagtcctccccgtcggttct
tccgagtggattcggggggcgacggcggggctcgccgacgaatcggtaaccgtgatggac
tcggtcccggctccagccgcgctcgccgccgatcggctcgacgatgtcgattgcgtcctg
actgacgaccgggacgttctcggtatcgttgacgaggcgtctcccgtcgtctatgccgct
gagccggcccgcaccgagtcgatcgacgacctccgcggcgatcccgaggtgatcgccaag
acgacgattcaggagccggcgatcctggaccgacggctccggcgggcggtcgagttcgcc
gcgatacagcggtcggcgacgcggcaggcggagtggtaccagacgctgatcgaacagtcg
tcggatctcctgctcgtcgtcaacaccgacggcgagatcacgtacaccagtccgtcggtc
gagcgcgtcggcgggttcgagacggacgaactctgtggtaacgacatcctcgagcacgtc
caccccgacgacagccagtcggtggccgacgagttcgaggccatccgcgcggccgactgc
ggaacgacacggaccatcgactacacgtgccaacattccgacgggtattggtacgtccac
gaagccgtgctgacgaatcggctcgatgacggcatcgtcgacggcatcgtcgcctcgatt
cgggatatcaccgagcaccaccgcatcgaacaggagctagacgagtcgttcaaacgggtc
accgacgcgttctacgccctcgacggggactggcggttcacgtacgtcaacgatcgcgcc
ctcgagcacctcgagttcaccaggtccgatctgctcggccgacggatactcgacgtgttc
ccggaactggaagggacggtattccagcgcgaggcgctcgaggcgatggaacaccaggaa
cgccggacgttcgaggggtatctcgagcgctgtgagagctggatcgaagcccgtctctat
ccgtcgccggcgggtctctccgtctactggcaggacgtgaccgagcgcgtcgaacgcgag
cgggacttgaccgagcggacggaacgcctgcagaccctcgtcgagaacgccccggtcgtg
ttgttcgtcctcgacgacgagggaacgttcacgctctcggagggacgcgggctcacgaac
ctcgggttcgattcgaccgacatcgttgggcagtcgttcaccgacctgcttgcggagtat
ccggacgcctgtgccgacattcgggcggcgctcgagggggaggcagtccactcgcagcga
ccgctcggggatcgggtcttcgaggcgtggtatcggccgatcacggacgacgacggggcc
gtcgatcgggttctcggcgtcgcgaacgatgttaccgaacgggtgcagtaccaggagacg
ctcaacgcgttacacgaggcgaccagccatctgctgagcgtcgattcgaaggcggctgcc
tgcgagtacatcgtcgacgtcgcgaccgacgtactgggcctcgacagcgtcgtttaccgg
tacgacgaccagcacaacgaactcgccgccgaggcgcgttcgccgaccctcgagcccgcg
ctcgatccgccatcgcggctccggcccgacgaaagcgtcgcctgggaggcgtttgtcacc
ggtgaaccggccgtctacgacgatatcaccgacaaaaacaacgtctacgacgagacgacg
gccgcacggagcgggctctacgttccgcttggcgaacacggggtactggtcgccctgtcg
actgccgccagcgagtatgacgaggacaccgtcgaactcgtgcagtcgttcgcggcgacg
gcggaagccgcgctcgatcgaatcggtcggacgcgccggctccacgaccgtgagcacgaa
ctcaagcagcaaaaccggcacctcgagcgactcaacgccgccaacgaggcacgccaggag
atcgaacagcacctcctgctggccgattcccgggccgagatcgaacgcggcgttcccgag
cgtctcgcggacctcgagtcgtgctcgctggcctggatcggcgagccggaccccagcggc
aacgaactccggtcgcgatcttgtgccgggtccgatcggggatatctcgatgccgtcgcg
gtgacgacggtcgccgagtcggccgccgaaccgacgggacgggcggctcggacgcgggac
ccggtctacgtcgacaacgtcgccgagtcgatccatgacggcgagtggcggggcaaggca
ctgtcgcgaaacttccagtccgcgtacgcagtgccgctcgtttacgacggcttcctctac
ggcgtcctgtcgatctacggcgaggaacggaacgcgttcgacgagacgctgcggtcgatg
ctggccgaactcggcgaaaccgtcgcctacgcgatcgatgccgtcaagcgaaagaacgcg
ctcgtgggcgacgaccacaccgaagtcgaactcgagatcgcggccgacgcgaccctgtgt
cggctcgcggatgcactcgacgatgcgctcacgtacgagggtgcaacgaggcgggcggac
ggttcgcagatcgttttcgtcgccgtcgaggacccggcggacgatcccgcggcgaccgtc
gatcggtccgcgatcgacggggtcgccgcggtgtcgacgattgccgagcacgaggacgag
atgctcctccaggtgcgactaaccgagcccttcctcggctcgatcgtcgatacccacggc
gctcggctgcgggaactcggtgcggccccctccggcgggcgcgcgatcatcgacgttccg
gagacggccgaggtccgcgacgtcctctcgggaatctcccggagcggtccggcggtgtca
ctgatcgctcggcgcgaggagtcgaccgccaaccggtcgacgctcggcggccccgcgcgc
agtaccctgctcgagcaactcaccgatcgacagcacgaggtcgtccagacggcctaccac
ggcgggttcttcgagtggccccgacgggccaacggcgaagagatcgcctcgtcgctcgac
atctcatcacccgccttccacaaacacgttcggtccgccgaacggaagctgttcgcggcg
ctgttcgagggatcgaccacgacggggttaactgattaa
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