Natrinema pallidum: FGF80_03105
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Entry
FGF80_03105 CDS
T06072
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
npl
Natrinema pallidum
Pathway
npl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FGF80_03105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npl03019
]
FGF80_03105
03009 Ribosome biogenesis [BR:
npl03009
]
FGF80_03105
04131 Membrane trafficking [BR:
npl04131
]
FGF80_03105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npl04147
]
FGF80_03105
Messenger RNA biogenesis [BR:
npl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FGF80_03105
Ribosome biogenesis [BR:
npl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FGF80_03105
Membrane trafficking [BR:
npl04131
]
SNARE
SNARE associated proteins
Others
FGF80_03105
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FGF80_03105
Exosome [BR:
npl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FGF80_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_33
AAA_22
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
AAA_25
ABC_tran
IstB_IS21
AAA_3
DUF815
AAA_24
Sigma54_activat
TsaE
AAA_18
AAA_17
NB-ARC
AAA_11
ATPase
AAA_30
Zeta_toxin
Parvo_NS1
PhoH
SLFN-g3_helicase
Bac_DnaA
AAA_19
bpMoxR
AAA_lid_PRS2_C
ATP-synt_ab
Zot
Motif
Other DBs
NCBI-ProteinID:
QCW02282
UniProt:
A0A4P9TEP1
LinkDB
All DBs
Position
646113..648374
Genome browser
AA seq
753 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMTELDLENGDYIVITGSGDGQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDNVTIEPADVKPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTSIEISETPAEQVQSGGGA
SAEGVPNVAYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDANFETISGPEIMSKYYGESEEQLREVFEEAEENAPSIIFIDELDSIAAKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPD
KEGRKEILQVHTRGMPLDEEIDLDQYAESTHGFVGADLESLARESAMNALRRIRPELDLE
SEEIDADVLDSLEVSERDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKEQLRETI
QWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARKAIFDVHTRNKPLAESVDLEW
LAAETEGYVGADIEAVCREASMAASREFINSVDPEEMDDTIGNVRIGKQHFEHALEEVNP
SVTPDTREQYEELEEEFQQAEPGQDEQLGRTFQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcactgtcaaaccactcaaacagaaagacgccggtcgcggactggccgcgatc
gaccgcgtatcgatgaccgaactcgacctcgagaacggtgattacatcgttatcacgggc
tcgggcgacggccaggccgtcgcacgcgtctggcccggctaccccgaagacgagggacgt
ggcatcgtccgaatcgacggccgcctgcgacaggaggccgacgtcgggatcgatgacaac
gtcacgatcgaacccgcggacgtcaaacccgcgaaatcggtcaccgtcgcgctcccccag
aacctccgcattcgaggggacatcggtccgctcgtccgcgacaagctttcgggccaggcc
gtcaccgagggccagacggtgccgttctcgctctcgttcggccccatggccagctccggc
caatcggtgccgctgaagatcgcgagcacctcgccgtcgggcaccgtcgtcatcacggac
tcgacgagcatcgagatctccgagacccccgccgaacaggtccagtccggcggcggcgcg
tccgcggaaggcgtcccgaacgtcgcctacgaggacatcggtggtctggacgacgaactc
gaccaggtccgcgagatgatcgagttgccgatgcgccaccccgaactgttccagcagctg
gggatcgagccgccaaagggcgtcctcctgcacggcccgccgggcacggggaagaccctg
atggccaaggcggtcgccaacgagatcgacgccaacttcgagacgatctccggccccgag
atcatgtcgaagtactacggcgaatccgaggaacagctccgcgaagtcttcgaagaggcc
gaggagaacgccccctcgatcatcttcatcgacgaactcgactccatcgcggccaagcgc
gaggaggccggcggtgacgtcgaacgacgcgtcgttgcccaactcctctcgctgatggac
ggcctcgaggaacgtggccgagtgacggtcatcgccgcgaccaaccgcgtcgacgcgatc
gatcccgcgctccggcgcggcggtcgcttcgaccgcgagatcgagatcggcgttcccgac
aaggagggccgcaaggagatcctgcaggtccacacccgcgggatgcccctcgacgaggag
atcgatctggatcagtacgccgagagcacgcacggtttcgtcggagccgacctcgagtcg
ctggctcgcgaaagcgccatgaacgcgctccgtcgcatccgtcccgaactcgacctcgag
tccgaggagatcgacgccgacgtactcgattcgctggaagtgagcgaacgggacttcaaa
gaggcgctcaagggtatccagccctccgcgatgcgcgaggtcttcgtcgaggttcccgac
gtcacgtggaacgacgtcggcggactgggcgataccaaagagcagcttcgcgagacgatc
cagtggccgctggactaccccgaggtgttcgagcagatggacatgcaggccgccaagggc
gtcctcatgtacggcccgccgggcacggggaagaccctgctcgccaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggccccgaactgctgaacaagtacgtcggc
gagtccgagaagggcgtccgcgaggtcttcgagaaggcgcggtcgaacgccccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggcgaacgcggccagcgccagggtgactcc
ggcgtcggcgaacgcgtcgtctcacagctcctgacggaactcgacgggctcgaggaactc
gaggacgtcgtcgtgatcgcgacgaccaaccggccggacctgatcgacagcgctctgctc
cgtcccggacgcctcgatcgccacgtccacgtgccggttcccgacgaggacgcgcgcaaa
gcgatcttcgacgtccacacccgcaacaagccgctggccgaatcggtcgacctcgagtgg
ctcgcggccgagacggagggctacgtcggtgccgacatcgaagcggtctgccgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgatcccgaggagatggacgacacc
atcggcaacgtccgcatcggcaagcaacacttcgagcacgcgctcgaggaggtcaacccg
agcgtcacccccgacacccgcgagcagtacgaggaactcgaagaggagttccagcaggcc
gagcccggacaggacgagcagctcggacgcaccttccagtaa
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