Natrinema pallidum: FGF80_05015
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Entry
FGF80_05015 CDS
T06072
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
npl
Natrinema pallidum
Pathway
npl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FGF80_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npl03019
]
FGF80_05015
03009 Ribosome biogenesis [BR:
npl03009
]
FGF80_05015
04131 Membrane trafficking [BR:
npl04131
]
FGF80_05015
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npl04147
]
FGF80_05015
Messenger RNA biogenesis [BR:
npl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FGF80_05015
Ribosome biogenesis [BR:
npl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FGF80_05015
Membrane trafficking [BR:
npl04131
]
SNARE
SNARE associated proteins
Others
FGF80_05015
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FGF80_05015
Exosome [BR:
npl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FGF80_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
AAA_17
AAA_18
AAA_lid_PRS2_C
ABC_tran
AAA_3
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_24
DUF815
ATPase
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
DUF6985
Motif
Other DBs
NCBI-ProteinID:
QCW02633
UniProt:
A0A4P9TD31
LinkDB
All DBs
Position
complement(1036834..1039062)
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWDDVGGLQDAKDQVQESVEW
PLSSPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEEMGDV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVDGRERILEIHTENTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDEEADIVEMRHFRQAMENVRPTITDDILDYYEQIEE
EFQGGTSGPDPTGRRGSRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaactggaggttgcgaaggcgtacccgaacgactcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatctgaagctgagtccgggcgacatcatcgag
atcgagggtgcagatacgactgctgcgaaagtctggcgtgcagaccggcaggactggaac
acggacaccgtccgtatcgacgggttcacccgacaaaacgccgatgtcggtatcggcgaa
cgggtgaccatccggaaggcggaagcgacgaaagccgacaaactggtgctcgcaccgccc
gaggaggcgtcggtgcagttcggttccgacgccgccggcatggtgaaacggcagatcctc
aagcggccggtcgtcggtcgcgacatcgttccggtgatgtcctcgacgaaccatccgttc
atgcggtcgccgggccaggcgatcccgctgatcgccgtcgagaccgaacccgagggagtg
gtcctcatcactgaagataccgacgtcgaactccgcgaggagcccatctcgggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctccaaaacgagatccaacgg
gtcagggagatggtggagctcccgatgaaacacccgcagatcttcaagaagctcggcatc
gagccgccacagggcgtgctcctccacgggccgccgggcaccgggaagaccctgctggcc
aaagcggtcgccaacgagacctccgccagtttcttctctatcgccgggccggagatcatc
tcgaagtactacggcgagtccgaacagcaactccgggagatcttcgaggacgccaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgactccatcgcgccgaaacgcgaagac
gtcaccggcgaggtcgagcgacgggtcgtcgcccagctgctgacgatgatggacggcctc
gagtcccggggccaggtcatcgtcatcgcggcgaccaaccgcgtcgacagcgtcgatccg
gcgctgcgccgtcccggccgcttcgaccgcgagatcgagatcggcgtccccgacgaaacg
ggccgcgaggagatcctccagatccacacccgcggcatgcccctctcggacgatgtcagt
ctcggccacctcgccgacgagacccacggcttcgtcggggccgacatcgagagcctcacc
aaggaggccgcgatgaaggcgctccggcgctacctccccgaaatcgatctcgacgaggag
gatatcccgccgagcctgatcgaccggatgatcgtcaaacgcgaggacttccggggcgcg
ctcaacgaggtcgaaccgagcgcgatgcgggaggtgctggtcgaactcccgaagatctcg
tgggacgacgtcggcggactccaggacgccaaggatcaggtccaggaatccgtcgagtgg
cccctctcgagccccgagcggttcgaccggctgggcgtcgatccgccggccggagtgttg
ctgtacggcccgccggggaccgggaagacgctgatggcgaaagccgtcgccaacgagacc
aacgcgaacttcatctcggtgcgcggcccgcagctcctcagcaagtgggtcggcgagtcg
gagaaagccatccgccagaccttccgcaaggcccgccaggtctcgccgacggtgatcttc
ttcgacgaactcgacgcgctcgcgccgggccggggcggtgaaaccggttcgaacgtctcc
gaacgggtcgtcaaccagctcctgaccgaactcgacgggttagaggagatgggcgacgtg
atggtcatcggcgcgaccaaccgcccagacatgatcgaccccgcactactgcgctcgggg
cgcttcgatcgactcgtcatgatcggcgaacccgacgtcgacggccgcgaacgcatcctc
gagatccacaccgagaacacgccgctggccgcggacgtcacgctgcgcgagatcgccgag
atcacggacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggcgatcgaa
gccctgcgcgaggacgaggaggccgatatcgtcgagatgcgtcacttccggcaggctatg
gagaacgtccggccgacgatcaccgacgatatcctcgactactacgagcagatcgaagag
gagttccagggcggcacgagcggccccgatccgacgggtcgtcgcgggagtcgcatcgga
ttccagtag
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integrated database retrieval system
