Natrinema pallidum: FGF80_06120 Help Entry FGF80_06120       CDS       T06072                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism npl  Natrinema pallidum Brite KEGG Orthology (KO) [BR:npl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:npl03400]     FGF80_06120 Enzymes [BR:npl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      FGF80_06120     5.6.2.6  RNA 3'-5' helicase      FGF80_06120 DNA repair and recombination proteins [BR:npl03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     FGF80_06120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WH_Lhr Helicase_C Intein_splicing LAGLIDADG_3 Cas3-like_C_2 HTH_31 HTH_ParB Motif Other DBs NCBI-ProteinID:  QCW02836 UniProt:  A0A4P9TDM3 LinkDB All DBs Position complement(1264692..1269164) Genome browser AA seq 1490 aa AA seqDB search MDGSEPLALPVDDDDLPFDPADVAIEDADVFELLEPAVQEWWLEEFGEFVPENEGFFTPP QQGAIPKIHDGTNTLVCAPTGSGKCVKPDTPMVIQDDGDATVVRAEDLLERRHRKVTDVD EDGELYTSSIEAYSLDEDELSLRESMVYSESYDGPMHRIQTSYGREVEVTPNHPLLVETS SGPEWRPASEIEDGDRIGIPTHIDLPERDIELNVGAALDRLRSEFPLVATEAESDRIVAR LEEEVPISAFDEYERRLALALADLTYADVADRLSIGLASVSKLVNGTSEYCSEEFLELLR EAYTRLPPGEVLVKTDNGRVSRFRYPTTLDSDLAELAAFVLGEGLIGEYERNRFVMITQK NRTEILERAMETMWDQFGIEFEQKSEIDYVISDAAFSVFFAELLDIEPGPGRDVSLPNWV LNASQPIKQSFLSTFLSLEAEVRSNEVRLVQANELKIEQLTYLLLSFGILPARGRQEKYA TNTDEQTQRTYHSLTIRGIENLSTLLSACSIVHPNVDQLEAHTTGQRSGNHIGRHVFDYR DIRALSKYFENDREFNAELGNIYEVARRSGYLTEQALDALSTKLQSLPSDETTQELAAKI DSIRSRNIAWVTVESNETSPYNGTIVDLSVPDTHNFVGGRGGLYLHNTLASFTSIINELY KRDRDTEDGLENSVYCLYVSPLKSLANDIHRNLEVPLDGIENIVDERDGGAESTGEIRHA IRHGDTSSSDRQRMLDETPHILNTTPETLAILLNSPKFREKLRTVEYVIVDEIHSLAAGK RGTHLAVSLERLEAMSEGDLTRIGCSATIEPLSRVAEFLVGREEPGGDPRDYEIVDARFA REFDMRLECPTDDLINTPREVVQERFYRMLHEHVQDHTNTLVFTNTRSGAERVLHNLRER FDAYDEANSGCHHGSLSKDVRQGIEARLKDGELDVVTTSTSLELGIDMPHVDLVVQVGSP KSVAALLQRIGRAGHRVGQTVTGRVIALDRDELLECAVMLKKATEGFVDSVSIPENAQDV AAQHVYGMAIAEIRPEAELTAILRRADPYRNYGEDEYESLMRYLTAEYAGLEERNVYAKV WRDENDPPDGQHHHEEFPVGEPLVGKRGRLARVIYMTNIGTIPDSFTCDVYTRASDEWVG QLDEQYLDTLETGDVFVLGGSNFEYRYRRGSKVYVDRTSARPTVPSWYSERLPLSSDLGR EILAFQDALLERYEAGGPPRVRAWLREFPLDDDSVRAIARLFDHQCRYAGTESVSTPDRL AVEVVRDRAEYDRHYYVHSAYGRRVNDGLSRLLAYRCAQEATANVRVAVADNGFVLSMPL NRKVDIDGIIADLEAEQVRTDLRASLSETDLLQRYFRINATRSLMILKRYKGYEKSASEQ QVSSEMLLGFADELEEFAVIEETYREILEDKLNVREIEDIVGAIDAGDLTVSRRQLDSPT PRAFGLATLSASDVVLAEDESAALQSFHERVLEEIGDESLAGLTGGTDDE NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atggacgggagcgagcccctcgcgttgccggtcgacgacgatgatctccccttcgacccg gccgacgtagccatcgaggacgccgacgtgttcgagttgctcgagcccgcggtacaggag tggtggctcgaggagttcggcgagttcgtccccgaaaacgagggcttctttacgccgcca cagcagggagccatcccgaagattcacgacgggacgaacacgctggtctgtgcgccgacc gggagcggaaagtgcgtgaagccggatacgccgatggtcatccaagatgatggggatgca acagtcgttcgggcggaagaccttctcgaacgccgacatagaaaagttacagatgttgac gaggacggcgaactgtacacgagttcgatcgaagcgtactcgctcgacgaagacgaactc tcgctccgtgagtcgatggtgtactcggaatcctacgacggaccgatgcatcggattcaa acgtcgtacggaagagaggtcgaggttacaccgaatcatccgcttctcgttgagacgtca tccggtcccgagtggcgaccggcaagtgagatcgaggacggtgaccggatcggaattcca acgcacatcgatcttcccgagcgtgacatcgagctcaacgtgggtgcagcgctcgatcgg cttcgatcggaattcccgctggttgcgaccgaggcggagtcagaccggatcgtcgctcgt ctcgaggaagaagtccccatttcggcgttcgacgagtacgaacggcgactcgcactcgca ctcgcggacctcacctacgcagacgtagcggatcgactgtccatcggcctcgcatccgtc tcaaagctcgtcaacggtacgagcgagtactgctccgaggaatttcttgagttacttcga gaagcgtatacgcggcttcctcccggcgaggtactcgtcaaaacggacaacggtcgcgtt tcccgatttcgctatccaaccacgctcgactctgatctcgcagaactggctgcgttcgtt ctcggagagggactcatcggagagtacgaacggaaccgatttgtgatgattacgcagaaa aatcggaccgagattctcgaacgcgcaatggagacgatgtgggatcagttcggtatcgaa ttcgaacaaaagtcggaaatcgactacgttatttccgacgcggcgttttccgtgttcttt gcagaactactggatatcgaacccggcccgggccgtgacgtgtcgcttccgaactgggtc ttgaatgcgtcacaaccgatcaaacagtcgtttctgtcgacgtttctgtcgttagaggcg gaggttcgatccaacgaggttcgtctcgtacaggccaacgagttgaaaatagagcagttg acatacctcttgctctcgttcggaattctcccggcccgcggtcgccaggagaagtacgcg acgaatacggacgaacaaacgcagcgaacgtatcattcgctcacaatccgcggaatcgag aacctgtcgacgctcctgtcagcgtgttcgatcgtccatccgaacgtcgaccagttggaa gcacacaccaccggacagcgttccggaaaccacatcggacggcacgtcttcgactatcgg gacattcgtgcgctgtcgaagtacttcgagaacgatcgggaattcaatgccgagctcggc aacatctacgaggtggccagacgaagcggatatcttacggaacaagcactggacgcgctg tctacgaaacttcagtcgctgccgtctgacgaaacgacacaagaactcgccgcgaagatc gacagtattcgcagccgaaacatcgcttgggtaaccgtagaatcgaacgagacatccccc tacaacggtacgatcgtcgatctcagtgttccggacacgcacaacttcgtcggtgggcgc ggtggattgtatcttcataatacactcgcatccttcacatcgatcattaacgagctctac aagcgtgatcgcgacaccgaagacggcctcgagaactcggtctactgcctctacgtctcg ccgctgaagtccctcgcgaacgacattcaccgcaatctcgaggtccctctcgatggaatc gaaaatatcgtcgacgaacgagacggcggcgcggaatcgacaggtgagatccggcacgcg atccgccacggcgacacgtcctcgagcgaccgccagcggatgctcgatgagacgccccac atcctcaacacgactcccgagacgctggcgatcctgctgaactcgccgaagttccgcgag aaactccggaccgtggagtacgtcatcgtcgacgagatccactcgctggccgcgggcaaa cgaggcacccacctcgcggtcagcctcgagcgactcgaggcgatgtccgagggggatctg acgcggatcggctgctcggcgacgatcgagcccctttcgcgggtggcggagttcctcgtc ggccgcgaggagccgggtggcgatccacgcgactacgagatcgtcgacgctcgcttcgcc cgcgagttcgacatgcgactcgagtgtccgaccgacgacctgatcaacacgccccgcgag gtcgtccaggagcggttctatcggatgctccacgagcacgtccaggaccacacgaacacg ctggtgtttacgaacacgcgttccggggccgaacgggtgcttcacaaccttcgcgagcgg ttcgacgcctacgacgaggccaactccggctgtcaccacggcagcctctcgaaggacgtc cgacaggggatcgaagcccgattgaaagacggcgaactcgacgtggtcaccacctcgacg agcctcgagttgggcatcgatatgccccacgtcgatctcgtcgtccaagtcggctcgccg aagtccgtcgccgccctgctccagcggatcggccgcgcgggccatcgggtcggccagacc gttaccgggcgcgtgatcgctctcgaccgggacgaactcctcgagtgtgcggtcatgctc aagaaagccaccgaggggttcgtcgactcggtgtcgatccccgagaacgcccaggacgta gcggcccagcacgtctacgggatggcgatcgccgagattcgccccgaggccgaactgacc gccatcctccgtcgggccgacccctatcgaaactacggcgaggacgagtacgagtcgctg atgcgatatctcaccgccgagtacgccgggctcgaggagcgaaacgtctacgcgaaggtc tggcgcgacgagaacgacccgcccgacggccaacatcaccacgaggaattccccgtcggc gaaccgctggtcgggaaacggggccgactcgcgcgggtcatctatatgacaaatatcggg acgatcccggactcgttcacgtgtgacgtgtacacgcgtgcgagcgacgagtgggtcggc cagttggacgagcagtacctcgacacgctggagacaggcgacgtcttcgtgctcggcggg agcaacttcgagtaccgctaccggcggggctcgaaagtctacgtcgatcgcacgagcgcc cgcccgaccgtcccctcgtggtactccgagcgactgccgctctcgtccgatctcggtcgc gagatcctcgcgtttcaggacgccctcctcgagcgctacgaggccggcgggccgccgcgg gtccgcgcgtggctccgggagttccccctcgacgacgacagcgtgcgggccatcgcccgc ctgttcgaccaccagtgtcgatacgccggcacggagagcgtgagcacgcccgaccgcctc gccgtcgaggtcgtccgggaccgagcggagtacgaccgtcactactacgtccactcggcg tacggtcgccgggtcaacgacggcctgtcgcggctgttggcctaccgctgtgcacaggag gcgaccgcgaacgtccgtgtagccgtcgcggacaacggcttcgtcctctcgatgccgctc aaccggaaagtcgacatcgacgggatcatcgccgatctcgaggccgagcaggtccggacg gacctgcgggcgtcgctctcggagacggacctgctccagcggtacttccggatcaacgcg acgcgctcgctgatgatcctcaaacgctacaagggctacgagaagtccgcgagcgaacag caggtctcgagcgagatgctgctcggcttcgcggatgaactcgaggagttcgcggtgatc gaggagacctaccgcgaaattctcgaggacaaactgaacgtccgcgagatcgaggacatc gtcggggcgatcgacgccggcgacctcaccgtttcgcggcggcaactcgactcgccgacg ccgcgggcgttcggtctcgccacgctgtcggccagcgatgtcgtcctcgccgaagacgag agcgccgccctccagtcgttccacgagcgcgttttggaggagatcggcgacgaatcgctg gcgggactgacggggggcacggacgacgaataa

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