Natrinema pallidum: FGF80_06145
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Entry
FGF80_06145 CDS
T06072
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npl03016
]
FGF80_06145
Enzymes [BR:
npl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FGF80_06145
Transfer RNA biogenesis [BR:
npl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FGF80_06145
Prokaryotic type
FGF80_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
DUF3701
Motif
Other DBs
NCBI-ProteinID:
QCW02840
UniProt:
A0A4P9TGG6
LinkDB
All DBs
Position
complement(1272813..1273721)
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AA seq
302 aa
AA seq
DB search
MTLRGPPAARSPAELLTFGVVNLDKPPGPSSHQVSGWLRDAVVETLAERGVASTIDRAAH
AGTLDPKVTGCLPVMLGDATRLAQVFLEGGKEYVAVLECHAPVPADAESVVAEFEGPIYQ
KPPRKSAVSRRLRVRELYDLEVLEVEDRRLLLRIRCESGTYVRKLCHDLGLALGTGAHMG
HLRRTATEPFDDRTLHSAHDFLDALGFWLEDDDPEPLYDIVDPAERILEGIPSIVIAENA
AREVANGAPVYAPGVLEADDGIDHGSLVACYTPDGAAVCLGERVGAADADSGLVVALERV
LV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccgtggcccaccggcggctcgctcgcccgccgagttgctcaccttcggtgtc
gtcaacctcgacaaaccccccggcccctcctcccatcaggtcagcggctggcttcgggac
gccgtcgtcgagacgctggccgagcgcggcgtcgcgtcgacgatcgatcgtgccgcccac
gccgggacgctcgatccgaaagtgaccggctgtctcccggttatgctcggcgacgcgacc
cgactcgcgcaggtcttcctcgagggcgggaaggagtacgtcgccgtcctcgagtgtcac
gcgccggtcccggccgacgccgaatcggtcgtcgcagagttcgagggcccgatctaccag
aagcccccgcgcaagagcgcggtctcgcgccgactccgcgtccgcgaactctacgatctc
gaggtgctcgaggtcgaggaccgccgcctcctcctgcgaatccgctgtgaaagcggcacc
tacgtccgcaaactgtgtcacgacctcgggctggcgctcggtaccggggcgcacatgggg
cacctgcgcagaacggcgacggagccgttcgatgaccgcacgctccacagcgcccacgac
ttcctcgacgccctcggcttctggctcgaggacgacgaccccgaaccgctgtacgacatc
gtcgatcccgccgagcggattctcgaggggattccgagcatcgtcatcgccgagaacgcg
gcccgcgaggtggccaacggcgcacccgtctacgcaccgggcgtgctcgaggccgatgac
gggatcgaccacggatcgctggtcgcctgttacacgcccgacggtgcagcggtgtgtctc
ggcgagcgggtcggtgccgcggacgctgacagcggtctcgtggtcgccctcgagcgcgta
ctcgtctga
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integrated database retrieval system
