KEGG   Natrinema pallidum: FGF80_06540
Entry
FGF80_06540       CDS       T06072                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
npl  Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:npl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npl03400]
    FGF80_06540
Enzymes [BR:npl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FGF80_06540
    5.6.2.6  RNA 3'-5' helicase
     FGF80_06540
DNA repair and recombination proteins [BR:npl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FGF80_06540
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: QCW02914
UniProt: A0A4V1IEW5
LinkDB
Position
complement(1331927..1334767)
AA seq 946 aa
MTDGDVAAFTHLGATVRGALSERGFSRPTAPQRLAIPPLSAGENTLVIAPTGSGKTETAM
LPVFDHLVAGDGPPEGFGALYITPLRALNRDMRDRLEWWGEYLDLAVDVRHGDTTDYQRS
KQAEDPPDVLITTPETVQAMLTGERLREALADVSHVVIDEVHELAASKRGAQLAIALERL
RDLAGPVQRIGLSATVGDPAEVGQFLTGGRPCEIREIDVGSNVDVTVREPEVTAEDERLA
GELLTEADTASHVRVIRDLVAEHESTLIFVNTRQTAEALGSRFKELELPIGVHHGSLSKE
ARIDVEDRFKAGEIDGLLCTSSMELGIDVGQVDHVIQYKSPRQVTRLLQRIGRAGHRQDA
VSSGTIVTTRPDDTFEALSIARRARDGEVEPAAIHEGSLDVVANQLPAIVQSRGDTPVDE
AVETVTRSYPFRNVPEATIREIIGELDRNRILWFDEGEDRIETTGGTWQYVYANLSMIPD
EETYEVHDIASGGQIGTLDERFVVNFAQPGAVFIQRGEMWRIAEIDDEEARVKVSPIEDP
AGEVPSWIGQEIPVPAAVAGEVGEIRAVAEPQLAAGADAAAVGRELAGRYPADEYTMTEA
CAQLERQIEGESPMPTAERLVLERQGRTIVLNAPFGHAANETLGRMLSALLGQRAGSSVG
LETDPYRIELEVPHSIATSEVIEVLEETDPDHVETIVELGLKNSDALAFRLTQVSAKFGA
LKRWQAKGSGRLSNDRLLSALEDTPMYEEAIREVFHEDLDIERASAVLEGVQSEALEVVT
HRGRTPVGLGGRSSGGKELLAPENADASVIQTVKERLRNDRVILLCTHCTEWKVKTTVKR
VADQPECPDCGSTRIASLNPWADEVVQAVRSQAKDAEQRELTERAFRAASLVQSHGKQAV
IAMAARGVGPHNAAQIINKLREDEAEFYRDILSKEREYARTQSFWD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgactgacggggacgtcgcggcgtttacgcacctcggagcgacggttcgtggcgcgctc
tccgaacgcgggttttcccgaccgacggcaccgcaacgactggcgattccgccgctgtcg
gccggcgaaaacacgctggtgatcgcgcccaccgggagcggcaagaccgagacggcgatg
ttgcccgtcttcgatcacctggttgccggcgacggtccgccggagggattcggcgcgctc
tatatcaccccgctgcgggccctgaaccgcgacatgcgcgaccgcctcgagtggtggggc
gagtacctcgacctcgcggtcgatgtccgccacggcgacaccacggactaccagcggagc
aagcaagccgaggatccgccggacgtgttgatcacgacgcccgagaccgtgcaggcgatg
ctgacgggcgagcgccttcgggaggcgctcgcggacgtttctcacgtcgtgatcgacgaa
gtccacgaactcgccgcttcgaaacgtggcgcgcagttggcgatcgccctcgagcggctc
cgggacctcgccggcccggtccaacggatcggcctctcggcgaccgtcggcgacccggcg
gaagtcgggcagttcctcacgggcggccgcccctgtgagatccgcgagatcgacgtcgga
agcaacgtcgacgtgacggtgcgcgaacccgaggtcacggccgaagacgagcggttggcg
ggggaactgctgaccgaagcggacacggccagccacgtccgagtgatccgtgacctggtc
gccgagcacgagtcgacactgattttcgttaacacgagacagactgccgaggcgctgggc
tcgcggttcaaggaactcgagttaccgatcggggttcaccacggctcgctctcgaaggag
gcccggatcgacgtcgaggaccggttcaaggccggcgagatcgacgggctgctgtgtacg
tcctcgatggagctcgggatcgatgtcggacaggtcgatcacgtgatccagtacaagagc
ccgcggcaggtcacgcgactcctccagcggatcgggcgggcgggccaccgacaggacgcg
gtctcgagcgggacgatcgtcacgacgcggccggacgacaccttcgaggcgctatcgatc
gcccgccgggcccgcgatggcgaggtcgagccggcggcgatccacgagggcagtctggac
gtggtcgccaaccagttgccggcgatcgtccagagccgcggggacacccccgtcgacgag
gccgtcgagaccgtcacgcggtcgtatccgttccggaacgtgcccgaagcgacgatccgc
gagatcatcggggaactcgatcgcaaccgcatcctgtggttcgacgagggcgaggaccgc
atcgagaccaccggcggcacctggcagtacgtctacgcgaacctctcgatgattcccgac
gaggagacctacgaggtccacgacatcgcctcgggaggccagatcggaaccttagacgag
cggttcgtcgtcaatttcgcccagcccggcgcggtgttcatccagcgaggcgagatgtgg
cggatcgccgagatcgacgacgaggaggctcgagtcaaggtcagcccgatcgaagacccc
gccggcgaggtcccctcttggatcgggcaggagatccccgttcccgccgcggtggcgggc
gaggtcggcgagattcgcgccgtcgcggaaccgcagttggccgccggggccgacgccgcc
gcggtcggtcgggaactcgcgggccgctatcccgccgacgagtacaccatgaccgaggcc
tgcgcccaacttgagcgacagatcgagggcgaatcgccgatgccgacggccgagcggttg
gtcctcgagcgacaggggcggacgatcgtcctcaacgcgcccttcggccacgcggccaac
gagacgctcgggcggatgctgtcggcgctgctgggccagcgggccggttcctcggttggt
ctcgagaccgatccctaccggatcgaactcgaggtcccgcactcgatcgcgaccagcgag
gtcatcgaggtgctcgaggagaccgatccggaccacgtcgagacgatcgtcgaactcggg
ctcaagaactccgacgccctcgcgttccggctgacgcaggtgtccgcgaagttcggcgca
ctcaagcgctggcaagcgaagggctcgggccggctctcgaacgatcggttgctctcggcg
ctcgaggacacgccgatgtacgaggaggcgatccgggaagtgttccacgaggacctcgat
atcgagcgcgcgagtgcggtactcgagggggtccaatcggaggcgctcgaggtggtgacc
caccgtggccggacgccggtcggactggggggtcggtcctcgggcggcaaggaactgctc
gcgccggaaaacgccgatgcgagcgtcatccagacggtcaaagagcggcttcggaacgac
cgcgtcatcctgctgtgtactcactgcacggagtggaaggtgaaaacgacggtcaagcga
gtggccgaccaacccgagtgtcccgactgtggctcgacgcggatcgcctcgctgaacccg
tgggccgacgaggtcgtgcaggcggtcaggtcccaggcaaaagacgcggagcagcgggag
ctgaccgaacgcgcgttccgagcggcgagtctcgtacagagccacgggaaacaggccgtg
atcgccatggccgcccgcggggtcggcccccacaacgccgcccagatcatcaacaagctc
cgcgaggacgaagccgagttctaccgcgacatcctctcgaaggaacgggagtacgcccga
acgcagtcgttctgggactga

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