Natrinema pallidum: FGF80_12025
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Entry
FGF80_12025 CDS
T06072
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npl03000
]
FGF80_12025
Transcription factors [BR:
npl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FGF80_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
Phage_integrase
PAS_4
PAS_9
PAS
GAF_2
GAF
HTH_20
GAF_3
Sigma70_r4
PAS_8
HTH_17
PAS_3
Motif
Other DBs
NCBI-ProteinID:
QCW03923
UniProt:
A0A4P9TGD9
LinkDB
All DBs
Position
complement(2419498..2421711)
Genome browser
AA seq
737 aa
AA seq
DB search
MGFEGTVGAVLTRREYESLLDAAETYREALVIRLCGDVGLRPTELTRLSIDDIEQVRIDP
PRYLIRVPTADDRGTRTAYLPTRVERELRRYARSNDLSSDDRVFTVTPRRLQMLVSDVAD
RASELFDESALADVSTSDLRRYFAHTALVDHNVNPRVVKTAGGWRSFEALESYLPEPTDT
EIVDAFDAVEGPSGPRSGDPQSGPAVSDDSVVRLLLAASDRYALVRLDADGYVERWNRSA
AALFGYRAGEIVGTHVSAFYTDDAVESGAPERTLSTALDESGCETEGWRVHEDGSRFRAT
EVVSPLRDDQGRHRGFAVFVRDGTAAHETLEAARQRRDELDRLYAVARRHRDLTAALLES
TDHEGVEMRTCDALADGRAYEFAWIDRATIADRRGRLASSGIDPDAIERVVPDDWQAADP
TAPLERSASAAEAVPEEGTVLVADDVTATLEADNQFEGAVARVALEYGDTVYGTLSVATE
RTDAFADDERTWLATIGRQVGYAIGAIRRRNLLLSDRLLELEVACRDERSFFVDTSRRLD
CRFELDSLVPIDESTHLYYVRLEGASPADVFDLADTAAGIEDCRLIETDEDGWRVEFVVE
GSCPIVTLTEYGVTVHEALFEGGSAAITGDCAADADLRTILDGLRSAFPDSELVGKRETE
RTVQTAREFREGLEDRLTDRQEAALRAAYFGGYYDWPRESTAEEVADAMGVSSPTLHNHL
RKGQHELLRTFLDDPEE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaggggactgtgggggcggtactcacccggcgggagtacgagtcgctgctc
gatgcggccgagacctaccgtgaagcgctggtgatccgactctgcggtgacgtcgggctt
cgaccgaccgaactgacccggctctcgatcgacgacatcgagcaggtacggatcgacccg
ccgcgatacctgatccgcgtgccgactgccgacgatcggggaactcgaaccgcgtacctc
ccgacccgcgtcgaacgggagctccgccgatacgcccggagcaacgatctctcgagcgac
gaccgggtgtttaccgttacgccccgtcggctccagatgctggtctcggacgtcgccgat
cgggcgagcgagctgttcgacgagtccgcactcgccgacgtttcgacgagcgatctccgc
cggtacttcgcccacaccgcgctggtcgaccacaacgtcaatcctcgcgtggtcaaaacc
gcgggcggctggcgcagtttcgaagccctcgagtcctatctgcccgagccgaccgacacc
gagatcgtcgacgccttcgacgccgtcgaggggccgtccggccctcgctccggcgacccc
cagtccggacccgccgtgagcgacgacagcgtcgtgcggctcctgttggccgccagcgat
cggtacgcgctcgtccgtctcgacgcggacggctacgtcgagcgctggaaccgcagcgcg
gccgcactgttcggctaccgggccggcgagatcgtcggcacccacgtctccgcgttctac
accgacgacgccgtcgaatcgggcgctcccgaacgcacgctctcgacggcgctcgacgaa
tccggttgcgaaaccgaggggtggcgcgtccacgaggacggctcgcggtttcgcgcgacc
gaagtcgtctcgccgctccgggacgatcagggccgccaccgcggcttcgccgtcttcgtc
cgcgacgggacggccgcacacgagacactcgaggccgcccgccagcgccgtgacgaactc
gaccggctgtacgccgtcgcccggcgacatcgggacctgaccgcagcgttgctcgaatcg
acggatcacgagggggtggagatgcggacatgtgacgcgctcgccgacggccgggcctac
gagttcgcctggatcgaccgggcgacgatcgcggaccgacgaggacgactcgcgtccagc
ggcatcgatcccgatgcgatcgagcgcgtcgtccccgatgactggcaagcggccgatccg
accgcgccactcgagcgctcggcgtcggcagccgaggccgttccggaggaggggacggtg
ctggtcgccgacgatgtcacggcgacgctcgaggcagacaaccagttcgagggagccgtc
gcgagggtcgcgctcgagtacggtgataccgtctacggaacgctatcggtcgcgaccgag
cgcacggatgcgttcgcggacgacgaacgcacgtggctggcgacgatcggccggcaagtc
ggttacgcgatcggtgccatccgtcgccggaacctgctgctgtccgaccgcctgctcgaa
ctcgaggtcgcctgtcgggacgagcgctcctttttcgtcgacacctcgcgtcgactcgac
tgccgcttcgagctcgactcgctggttccgatcgacgaatcgacccacctctactacgtt
cgactcgagggggcgtcgccggccgatgtcttcgatctcgccgacaccgccgccgggatc
gaggactgccggctgatcgagaccgacgaggacggctggcgcgtcgagttcgtcgtcgag
ggctcctgtccgatcgtcacgctgaccgagtacggtgtgaccgtccacgaggcgctcttc
gagggcgggtcggcggcgatcaccggcgactgcgcggccgacgccgacctcaggacgatc
ctcgacggtctccgttcggcgttccccgactccgaactggtcgggaaacgcgagaccgag
cggaccgtccagaccgcccgcgagttccgcgaagggctcgaggatcggttaaccgaccgc
caggaggccgccctccgcgcggcctacttcggcggctactacgactggcctcgggagagc
acggccgaggaagtcgccgacgccatgggcgtctcctccccgacgctgcacaatcacttg
cggaaaggccaacacgaactgctccgaacgttcctcgacgatcctgaggagtag
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