Natrinema pallidum: FGF80_12580
Help
Entry
FGF80_12580 CDS
T06072
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npl03400
]
FGF80_12580
DNA repair and recombination proteins [BR:
npl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FGF80_12580
Archaeal homologous recombinant proteins
FGF80_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_13
AAA_15
SMC_N
AAA_29
AAA_21
AAA_27
ABC_ATPase
Knl1_RWD_C
Laminin_I
ATG16
SbcC_Walker_B
Spectrin_Anc-1
COG6_N
ABC_tran
FapA
TMPIT
DUF4200
DUF1664
Viral_helicase1
MukB
NACHT
ZnF_RZ-type
Baculo_PEP_C
Mating_N
Fib_alpha
CENP-F_leu_zip
DUF3450
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
QCW04021
UniProt:
A0A4P9TGM2
LinkDB
All DBs
Position
complement(2547586..2550270)
Genome browser
AA seq
894 aa
AA seq
DB search
MRVDRVQLLNFKCYGDADLTLERGVTVVHGVNGSGKSTLLEAVFFALYGSKALDDRTLDD
VITTGEEEAAVELWFTHDDREYHVERRLKLRGDRAATTKCVLETPTETIEGARDVRREVT
QLLRMDADAFVNCAYVRQGEVNKLIHASPSDRQDMIDDLLQLGALEDYRERASEARLGVK
AVLDGQREVLEDVRTQVEQKEAKDLHERLNSLESRRTDVVEEIDHYETQREQATETLETA
EDVLDRHEETREEIAELTADIEALRSNISETERKREAAGDEISEVRDRREELAAERGDLL
ETVDLESDDPDEDVVRDRIAELEARDEELGDELQELTVTIQTGTDEIERLREAADDCEAQ
AERAREEADDLDERIEADEEAIADREAKLEDLEAEIESARATFDDAPITFGEAASHLDDL
ETEREELDAAINDITADIRTAENAIEEGERLLEEGKCPECGQPVEDSPHVDVLDDRREEL
ADLEADREDLDAERENLDDRIDRAEALREAERRVERLAENRDNIEQLLAEKRERLADRRD
QRDQLRADAAEYDADADEKRSAAANREDEVADARAELGEINTERGELTETLESLERISAI
ADERASLESEIETLRERRQDWKDMNDERRETLSEKRDRKRDLESEFDEDRIETAREDKAN
AERYIEQVDDKLAELEEQRTEMQNAIGAAENELEELERLRDRLESVEDRCERLESLYEEA
ETLQTTYGDLRAELRQHNVETLERLLNETFELVYQNDSYAAIDLDGDYRLTVYQKDGEAL
EPEQLSGGERALFNLSLRCAIYRLLAEGVDGSAPMPPLILDEPTVFLDSGHVTQLVSLIE
SMRELGVEQIVVVSHDEELVGAADSLVRVEKDATSNRSRLEHGEPPDVELLASD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcgatcgcgttcagttgttgaacttcaagtgttacggcgacgccgatctcacg
ctcgagcgcggcgtcaccgtcgtccacggcgtcaacggcagcgggaagtcgacgctgctc
gaggccgtcttcttcgcgctctacggctcgaaggcgttggacgaccgcacgctcgacgac
gtcatcacgaccggcgaggaggaagcggcggtcgaactgtggtttacccacgacgaccgc
gagtaccacgtcgagcgccggctcaaactgcgcggcgaccgcgcggccacgacgaagtgc
gtactcgagacgccgaccgagacgatcgagggcgctcgcgacgttcgtcgggaggtcacg
cagctcctgcggatggacgccgacgcgttcgtcaactgcgcgtacgtccggcagggcgag
gtcaacaagctcatccacgcctcgccgagcgatcgccaggacatgatcgacgacctcctc
cagctgggcgcgcttgaggactaccgggagcgcgccagcgaggcccgcctcggcgtcaaa
gcggtgctggacggccagcgggaggtcctcgaggacgttcgcactcaggtcgagcagaaa
gaggcgaaggacctccacgagcggctgaacagcctcgagtcccgccgaactgacgtcgtc
gaggagatcgatcactacgagacacagcgcgagcaggccacggagacgctcgaaacggcc
gaagacgtcctcgaccgccacgaggagacccgtgaggagatcgcggaactgactgccgat
atcgaggccctccgatcgaatatttccgagaccgagcgcaagcgcgaggcggcgggcgac
gagatcagcgaggttcgggaccgccgcgaggaactcgcggccgaacgcggcgacctcctc
gagaccgtcgacctcgagagcgacgaccccgacgaggatgtggtccgggaccgcatcgcg
gaactcgaggctcgcgacgaggaactcggcgacgagctacaggagttgacggtgacgatt
caaaccgggaccgacgagatcgagcgactccgcgaggcggccgacgactgcgaagcgcag
gccgaacgcgctcgcgaggaggccgacgacctcgacgagcgaatcgaggccgacgaggag
gcgatcgcggaccgcgaggcgaaactcgaggacctcgaggcggagatcgaatccgcgcgg
gcgacgttcgacgacgcgccgatcacgttcggcgaggcggcgtcccacctcgacgacctc
gagaccgaacgcgaggagctggacgcggcgatcaacgacatcactgccgacatacgcacc
gccgagaacgcgatcgaggagggcgaacggctgctcgaggaggggaagtgtcccgagtgt
ggccagccggtcgaggactcgccccacgtcgacgtgctcgatgaccgccgggaggaactc
gccgacctcgaggccgaccgcgaggacctcgacgcggagcgtgagaacctcgacgaccgg
atcgaccgcgccgaggcgctccgggaggccgaacggcgagtcgagcgactcgcggaaaat
cgcgacaacatcgaacagttactcgccgagaaacgcgaacgtctcgcggaccggcgcgac
cagcgcgatcagctccgagcggacgccgcggagtacgacgccgacgccgacgaaaagcga
tccgcggcggccaaccgtgaggacgaggtggcagacgcacgggccgaactcggcgagatc
aacaccgagcgcggggagctcacggagaccctcgagtccctcgaacgcatttccgcgatc
gccgacgagcgggcgagtctcgagagcgagatcgaaaccctccgcgaacggcggcaagac
tggaaggacatgaacgacgagcgccgcgagaccctttccgaaaagcgcgaccgcaaacgc
gatctcgagtcggagttcgacgaggaccgcatcgaaacggcacgcgaggacaaggccaac
gccgagcgctacatcgaacaggtcgacgacaaactcgccgaactcgaggagcagcggacc
gagatgcaaaacgccatcggtgccgccgagaacgaactcgaagaactcgagcggcttcgc
gaccgcctcgagtcggtcgaggatcgctgtgagcgactcgaatccctctacgaggaggcc
gagaccctccagaccacgtacggtgacctgcgggcggaactgcgccaacacaacgtcgag
accttagagcggctgctcaacgaaacgttcgaactggtctatcagaacgattcctacgcg
gcgatcgatctcgacggcgactaccggctgacggtgtatcagaaagacggcgaggcgctc
gagcccgaacagctatccggcggcgaacgagcactgttcaacctcagcctgcggtgtgcg
atctaccggctgctcgccgagggcgtcgacggatcggcaccgatgccgccgctgattctc
gatgagccgacggtgtttctcgattcgggtcacgtgacccaactcgtctcactgatcgag
tcgatgcgcgagctcggcgtcgaacagatcgtcgtcgtgagccacgacgaggaactcgtc
ggcgcggccgactcgctcgtccgcgtcgagaaagacgccacgtcgaaccgctcgcggctc
gaacacggtgaaccgccggacgtagaactactcgcgtccgactag
DBGET
integrated database retrieval system
