Natrinema pallidum: FGF80_14315
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Entry
FGF80_14315 CDS
T06072
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npl03036
]
FGF80_14315 (smc)
Chromosome and associated proteins [BR:
npl03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FGF80_14315 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
Crescentin
AAA_13
DUF1664
Tropomyosin
ATG16
AAA_29
EzrA
AAA_15
DUF724
GAS
APG6_N
ERM_helical
DUF4407
CENP-F_leu_zip
TMF_TATA_bd
Fib_alpha
TPR_MLP1_2
Fez1
FPP
DUF4201
Laminin_II
Exonuc_VII_L
AAA_27
DUF3584
DUF3450
CHASE7
NPV_P10
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
QCW04332
UniProt:
A0A4P9TJW5
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All DBs
Position
2885489..2889061
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AA seq
1190 aa
AA seq
DB search
MYIKAIVLDDFKSFGRKTKIPFYEDFTVVTGPNGSGKSNIIDAVLFALGLARTRGIRAEK
LTDLIYNPGHEGADTSSGPREATVEVILDNSEGTLERSQVVNAAGSDDVGDVDEIRIRRR
VKETEDNYYSYYYLNDRSVNLSDIQDLLAQAGITPEGYNVVMQGDVTEIINMTPHARREI
IDEIAGVAEFDAKKEDAFEELETVQERIDEAELRIEEKRDRLEQLADERRDAMRYRRLRR
EKEEYESYKKASELEEKRTELEAVEDEVDDLEDELADFQRELDEREGKVVRLQEDLEDLN
AEIERKGEDEQLRIKSEIEELKGDISRLEDRIEASEGQIEDAEAERREAFVQIDRKQETI
DDLEDEMREHKLEKASIKSEIQDREQERADLEAEIEAVDTEFDELKAALAERKDELEEAK
TERNDLQREQDRLLDEARRRSNAISEKETTIEDRREKIPEIESQRGDLERELEKAERNRE
NITDVVDDLKTEKRRLQSDIDDLDDEIQAKQQEYAELEANAGESGDSSFGRAVTTILNAG
LDGVHGAVAQLGTVPGEYATACETAAGGRLANVVVDDDIIGQQCIDHLKSRNAGRATFLP
LTDMSQRRLPNAPSDPGVVGFAYNLVDFDSEYAGVFSYVLGDTLVVEDIETARSYMGDYR
MVTLDGDLVEKSGAMTGGSGGGSRYSFTGGGEGQLERVAKQITELQEERESLREDLRGVE
ERLDDARDRKNDAADEVRSIEAELAGLDDEREAIEAEIEDLADDLDDLRDERESVDERMN
EISAEIDAKTATVEELEAEIDDLETELADSKIPELTDQIEALTAEIDEREDRIQELDAEL
NELSLEAEYAADAIEDLHDDIEAAQNRKADHEERIAEYEAKIEDKRETLEDKHEAVAELE
EELTELKAERSDLKAELADARTKRDQQQDRVNAIESKLEDARERAGNLEWEIEALESEVG
DYDPEDVPDHETVLDMIDYLQTDMASMEPVNMLAIDEYDEVRSDLDDLEAGRETLVEEAD
GIRDRIEQYETQKKQTFMDAYDAIAAHFTEIFEKLSEGTGSLHLENEADPFDGGLTMKAQ
PGDKPIQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEIDAFLDAVNAERVGEMVEE
LAGDAQFVVVSHRSAMLDRSERAIGVTMQQDNVSAVTGIDLSSGEVPADD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaggcgatcgttctcgacgatttcaagagcttcggccgaaagacgaagatc
ccgttctacgaggatttcaccgtcgtaacgggtccgaacggctccgggaagtccaatatt
atcgacgccgtcctcttcgcgctcgggctggctcggacccgtgggattcgtgccgagaaa
ctgaccgacctcatctacaaccccggccacgagggtgccgacacctcgagcggcccccgc
gaggcgaccgtcgaggtgatcctcgacaattccgaagggaccctcgaacgctcgcaggtc
gtcaacgccgcggggagcgacgacgtcggcgacgtcgacgagattcgcatccgtcgccgg
gtcaaggagaccgaggacaattactactcctactactatctgaacgaccggtcggtcaac
ctctcggacattcaggacctgttagcacaggccgggatcacgccggaagggtacaacgtc
gtcatgcagggcgacgttaccgagatcatcaacatgacgccccacgcccgccgggagatc
atcgacgaaatcgcgggcgtcgcggagttcgacgcgaaaaaggaagacgccttcgaggaa
ctcgagacggtccaggaacggatcgacgaggccgaactccgcatcgaggagaaacgcgac
cggctcgagcagctcgcggacgaacgccgggacgcaatgcgctaccgccggctgcgacgc
gagaaagaggagtacgagagctacaagaaggccagcgaactcgaggagaaacgcaccgaa
ctcgaggccgtcgaggacgaggtcgacgacctcgaagacgaactcgcggacttccagcgc
gaactcgacgagcgtgagggcaaagtcgtccgcctgcaggaggatctcgaggatttgaac
gccgagatcgagcgcaagggcgaggacgaacagctccggatcaaaagcgaaatcgaggag
ctcaaaggcgacatttcccggctcgaggacaggatcgaggccagcgaggggcagatcgag
gacgccgaggccgagcgccgcgaggcgttcgtccagatcgaccgcaagcaggagacgatc
gacgacctcgaagacgagatgcgcgagcacaaactcgagaaagcctcgatcaaaagcgag
attcaagaccgggagcaagagcgcgccgacctcgaagccgaaatcgaggccgtcgacacc
gagttcgacgaactcaaggcggccctcgcggagcgcaaagacgaattagaggaggccaag
accgagcgaaacgacctccagcgcgaacaggatcgcctccttgacgaggcccgccgccgc
tcgaacgcgatcagcgagaaagagacgacgatcgaggacaggcgagagaaaatccccgaa
atagagagccagcgaggcgacctcgagcgggaactcgagaaggccgaacggaaccgcgag
aacatcaccgatgtcgtcgacgacctgaaaaccgagaagcgccggttgcagtccgacatc
gacgatctcgacgacgagattcaggcgaaacaacaggagtacgccgaactcgaggccaac
gccggcgagagcggtgactcctcgttcggtcgcgcggtgacgacgatcctcaatgcggga
ctcgacggcgtgcacggtgcggtcgcgcaactggggaccgtccccggcgagtacgcgacc
gcctgtgagaccgccgcgggcggccggctggcgaacgtcgtcgtcgacgacgacatcatc
ggccagcagtgtatcgatcacctcaagtcccgaaacgcgggccgggcgacgttcctcccg
ctgacggacatgagccagcgccggctgccgaacgcgccgagcgatccgggcgtggtcggc
ttcgcgtacaacctcgtcgacttcgacagcgagtacgccggggtcttctcctacgtgctc
ggggacaccttggtcgtcgaggacatcgaaaccgcccgctcgtacatgggcgactaccgg
atggtcaccctcgacggcgacctcgtggagaaaagcggcgcgatgaccggcggttccggc
ggcggttcgcggtactcctttaccggcggcggcgagggccaactcgagcgcgtcgccaaa
cagatcacggagctgcaggaggaacgcgagtccctccgcgaggacctgcgcggcgtcgag
gagcggctcgacgacgcccgcgaccgcaagaacgacgcggccgacgaggttcgctcgatc
gaggccgaactggcgggactcgacgacgagcgcgaggccatcgaggccgagatcgaggac
ctagcggacgacctcgacgacctccgcgatgaacgagagtccgtcgacgagcggatgaac
gagatttcagcggagatcgacgccaagacggcgacggtcgaggaactcgaggccgaaatc
gacgacctcgagacggaactcgcggactcgaagatcccagaactcaccgaccagatcgag
gcgctgacggccgagatcgacgagcgcgaggatcggattcaggaactcgacgccgaactc
aacgagttgagcctcgaggcggagtacgcggcggacgccatcgaggatctccacgacgac
atcgaggccgcccagaaccgcaaggccgaccacgaggagcgaatcgcggaatacgaggcg
aagatcgaggacaagcgcgagacgctcgaggacaagcacgaggccgttgcggagttggaa
gaggagctcaccgagttgaaagcggaacgaagcgatctcaaggcggaactcgccgatgcg
cggacgaagcgcgaccagcaacaggatcgcgtcaacgccatcgaaagcaaactcgaggac
gcacgcgaacgtgcgggcaacctcgagtgggagatcgaagccctcgaatcggaggtcggc
gactacgatcccgaagacgtccctgaccacgagaccgtcctcgacatgatcgactacctg
cagacggacatggcgtcgatggagccggtcaacatgctcgcgatcgacgagtacgacgag
gtccgcagcgatctcgacgatctcgaggcggggcgggagacgttggtcgaggaggccgac
ggtatccgagaccggatcgagcagtacgaaacccagaagaagcagacgttcatggacgcc
tacgacgcgatcgccgcccacttcaccgagattttcgagaagctctcggaggggaccggc
tcgctgcacttggagaacgaggccgacccgttcgacggcgggctgacgatgaaggcacag
ccgggtgacaagccgattcagcgcctggacgcgatgtccggcggggagaaatcgctgacc
gcgctggcgttcatcttcgcgatccagcggcacaatccggccccgttctacgcgctggac
gagatcgacgccttcctcgacgccgtcaatgccgagcgggtcggcgagatggtcgaggaa
ctggccggggacgcccagttcgtcgtcgtctcccaccgctcggcgatgctcgatcgctcc
gaacgggcgatcggcgtgacgatgcaacaggacaacgtgagcgcggtgaccgggatcgat
ctgagtagtggggaggtaccggctgatgactag
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