Natrinema pallidum: FGF80_14545
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Entry
FGF80_14545 CDS
T06072
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npl03000
]
FGF80_14545
Transcription factors [BR:
npl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FGF80_14545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
PAS
PAS_9
PAS_4
HTH_10
PAS_3
GAF_2
GAF
PAS_8
GAF_3
HTH_20
Sigma70_r4
Autoind_bind
GerE
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QCW04374
UniProt:
A0A4V1IFB1
LinkDB
All DBs
Position
complement(2934188..2936278)
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AA seq
696 aa
AA seq
DB search
MSDDPADRTDSTTGSDRDATDGNRVDGRTDRHFEIHELSTLVDDCAVAPFGPDGRVNRWN
DGARRLTGYDAETIVGAHYRTFFPPDARESDRPERVLERARSNGTAETEGWRLRDDGDRI
RVHEVVAPVREDDEIGVPVDRPVELAGYVWLVHDRTEDYERERTLREETAFAESVFEAQP
DIVYAFDADENHLEWNERVRAVTGYTDAELAEMEPLEFVAPEDRDRIAGTIRRLLEVDEY
VTAEADLVTKDGRRIPYEFNSARITDDDGAVLGFTGTGRDISDRKARERELERLERLNAI
VRTIDETVVAAETRDEIEQAIVEEFAAADAYRFAAIGRTEPAASTAGYSWEPTVRAGIDT
TAVDGVLPSFVEPPADAPGVSPFETRSTQRYRHLHESPIDEWRADARERGYGSVAVVPIV
ATDRAFGALVVAAAEPSAFADREREILQEFGGTVGHAINAMAVRRLLYLDTVVELEFEST
DVGDSCIALSHGAGCDLSVDHVLPLTDEVFVYYLTVSDIDPDAIRAVARDTPSITELRLI
DAADDESDWEVVVRDATVAGLLGEYGARLQSQVVHDGVAELTVHVSLDTDLRDLVGAITS
TYPDTELVSKRTIERPIRTHGDFRRTVESILTEKQRLALEAAYHGGYFEWPTRNSDASEI
ADRLDIARQTFHQHLRVAQAKLLSAYFGARNETTTG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgatccggccgatcgaaccgattcgacgaccggatcggaccgtgacgcaacg
gacggcaaccgggtcgacgggcgaaccgatcgtcacttcgagatccacgaactcagtacg
ctcgtcgatgactgtgcggtggcaccgttcggccctgacggccgcgtgaaccggtggaac
gacggtgcgcgtcgactcaccgggtacgacgcggagacgatcgtgggggcacactaccgg
acgttctttccgccggacgcacgcgaatccgaccggcccgaacgggttctcgagcgagcg
cgatcgaacgggacggccgaaaccgaggggtggcgtctccgggacgacggcgaccgcatc
cgggttcacgaggtagtcgcgccggtccgcgaggacgacgagatcggcgtccccgtcgac
cggccggtcgagttggcggggtacgtctggctcgtccacgaccgcaccgaagactacgag
cgcgaacgcaccctccgcgaagagacggcattcgccgagagcgtcttcgaggcccagccg
gacatcgtctacgcgttcgatgcggacgagaaccacctcgagtggaacgagcgggtgcgg
gcggtgacgggctacaccgacgcggagttggccgagatggagcccctcgagttcgtcgcc
cccgaggaccgggaccggatcgccgggacgattcgacggctgctcgaggtcgacgagtac
gtcaccgccgaagcggacctcgttacgaaagacggccggcggattccctacgagttcaac
agcgcacggatcaccgacgacgacggcgcagtcctggggtttaccggtaccggtcgggac
atcagcgaccgcaaggcccgcgagcgggaactcgagcgcctcgagcggctcaacgcgatc
gtacggacgatcgacgaaaccgtggtcgcggccgagactcgcgacgagatcgagcaggcg
atcgtcgaggagttcgcggccgccgacgcctaccggttcgcggccatcgggcggaccgaa
cccgccgcgagtaccgcaggctactcgtgggaaccgacggtacgggcggggatcgacacg
accgcggtcgacggcgtgctcccgtcgttcgtcgagccgccggccgacgcgcccggcgtg
tcaccgttcgagacccggtcgacacagcgataccggcatctccacgagagcccgatcgac
gagtggcgggccgacgcccgcgagcgcggctacggatcggtggcggtcgtcccgatcgtc
gcgaccgaccgcgccttcggcgcgctcgtggtggccgccgccgagccgtcggcgttcgcc
gatcgggaacgagagatcctccaggagttcggcggcaccgtcggccacgcgatcaacgcg
atggctgtccggcgactcctctatctggacaccgtcgtcgaactcgagttcgaatcgacc
gacgtcggtgacagctgtatcgcgctttcccatggggccggctgtgacctctcggtcgat
cacgtgctaccgctgaccgatgaggtgttcgtctactatctcaccgtctccgatatcgat
cccgacgcgattcgtgcggtcgcgcgggacaccccctcgatcacggaactccgactcatc
gacgccgccgacgacgaaagcgactgggaagtcgtcgttcgcgacgcgacggtcgccggg
ctcctcggagagtacggcgcacgcctccagtcacaggtcgttcacgacggcgtcgcggag
ctgacagttcacgtgagcctcgacacggatctgcgcgacctcgtcggggcgatcacgtcg
acgtaccccgataccgaactcgtctcgaagcgaaccatcgagcgaccgatccggacacac
ggcgacttccggcggaccgtcgaatcgatcctgaccgagaaacagcgactggctctcgag
gcggcctatcacggcggctacttcgagtggccaacgcgaaacagcgacgcgagcgagatc
gccgatcggctcgacatcgcccgccagacgttccaccagcatctccgagtggcacaggcg
aagctcctctcggcgtacttcggggcacggaacgagacgacaactgggtga
DBGET
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