Natrinema pallidum: FGF80_15605
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Entry
FGF80_15605 CDS
T06072
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
npl
Natrinema pallidum
Pathway
npl03030
DNA replication
npl03420
Nucleotide excision repair
npl03430
Mismatch repair
npl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGF80_15605
03420 Nucleotide excision repair
FGF80_15605
03430 Mismatch repair
FGF80_15605
03440 Homologous recombination
FGF80_15605
03460 Fanconi anemia pathway
FGF80_15605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npl03000
]
FGF80_15605
03032 DNA replication proteins [BR:
npl03032
]
FGF80_15605
03400 DNA repair and recombination proteins [BR:
npl03400
]
FGF80_15605
Transcription factors [BR:
npl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FGF80_15605
DNA replication proteins [BR:
npl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FGF80_15605
DNA repair and recombination proteins [BR:
npl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FGF80_15605
MMR (mismatch excision repair)
FGF80_15605
DSBR (double strand breaks repair)
HR (homologous recombination)
FGF80_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_MEIOB_N
OB_Ssb-like
CDC24_OB3
SHLD2_OB1
AMIN
Motif
Other DBs
NCBI-ProteinID:
QCW04566
UniProt:
A0A4P9TI28
LinkDB
All DBs
Position
complement(3132746..3134212)
Genome browser
AA seq
488 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGGIADIE
PGMEEAKFVAKVLSIGEKRTFERDGEDEDGQVVNVEVADETGSVRAAFWDDHAEAAIDEL
EEGQVLRIAGRPKEGFSGVEISVDNVEPDPDTEIDVQVSDTYTVEDLSLGLSNVNLVGVL
LDTDSVRTFDRDDGSEGKVSNLVLGDSTGRVRVTLWDEQADLATELEAGTTVEVIDGYVK
DRDGSLELHVGNRGAVEEIDATVEYVPENTPIEDVEIDHVVDIAGVVRSADPKRTFDRDD
GSEGQVRNIRVQDATDDIRVALWGDKADLDVGPGDEVALGDVEIQDGWQDDLEASAGWQS
TITVLESESSGSGTADDGSSNPTDENAGLSAFAGDTDDSGEETAADGTGRTDATESADTA
GAAAGSDDPDDGEELEFTGVVVQAGSPVVLDDGETTMSVATDADVGLGEEVTARGVVRDG
HLEANDVF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggcgtatatgaggacctcgaggccgacgtttctctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatgggtggactcgcggacgaggagacggcg
gcgatgctcgtcgctcacgaagtcggcgagagcgaggtcggcggcatcgccgatatcgaa
cccgggatggaagaggcgaagttcgtcgcgaaagtgctctcgatcggcgagaaacggacc
ttcgagcgcgacggcgaagacgaggacgggcaggtcgtcaacgtcgaggtcgcggacgag
accggctccgttcgagcggccttctgggacgaccacgccgaagcagccatcgacgaactc
gaggagggacaggtcctgcggatcgcgggccgcccgaaggagggcttttccggcgtcgag
atcagcgtggataacgtcgaaccggacccggataccgaaatcgacgtgcaggtctccgat
acgtacaccgtcgaggacctctcgcttggcctctcgaacgtcaacctcgtcggcgtgctt
ctagataccgacagcgtccgcacgttcgaccgcgacgacggctccgaggggaaagtctcg
aacctcgtcctcggggattcgaccggccgcgttcgcgtcacgctctgggacgagcaagcg
gacctcgccacggagctcgaggccgggaccaccgtcgaggtgatcgacggctacgtcaag
gaccgcgacggcagcctcgaactccacgtcggcaaccgcggtgccgtcgaggaaatcgac
gcgacggtcgagtacgttcccgagaacacgccgatcgaagacgtcgaaatcgatcacgtg
gtcgacatcgcgggcgtcgtccggtcggccgacccgaagcggacgttcgaccgcgatgac
ggttcggagggacaggtccgcaacatccgtgtccaagacgcgaccgacgacatccgcgtc
gccctctggggcgacaaggccgacctcgatgtggggccgggggacgaggtcgcactcggc
gacgtcgaaattcaggacggctggcaggacgatctcgaggcctcggcgggctggcagtcg
acgatcacggttctcgagtccgagtcgtccggctccggcactgccgacgacgggtcgagc
aacccgaccgacgaaaacgccggtctgtcggccttcgccggcgacacggacgactcgggc
gaggagacggcggcggacggtaccggccggaccgacgcgacggagtcggccgacaccgcc
ggcgcggctgccggctcggacgatcccgacgacggcgaggaactcgagtttaccggcgtc
gtcgtgcaggccggcagcccggtcgttctcgacgacggcgagacgacgatgagcgtcgcg
accgacgccgacgtcggtctcggggaggaggtaaccgcccgcggggtcgtccgcgacggg
catctcgaagcaaacgacgtattctga
DBGET
integrated database retrieval system
