Natrinema pallidum: FGF80_16385
Help
Entry
FGF80_16385 CDS
T06072
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
npl
Natrinema pallidum
Pathway
npl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FGF80_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npl03021
]
FGF80_16385
Transcription machinery [BR:
npl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FGF80_16385
Prokaryotic type
Archaeal type
TFB
FGF80_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
DZR
Zn_ribbon_6
RB_B
Trm112p
Motif
Other DBs
NCBI-ProteinID:
QCW04703
UniProt:
A0A4P9TIK3
LinkDB
All DBs
Position
complement(3296010..3296909)
Genome browser
AA seq
299 aa
AA seq
DB search
MADSDSAAICPECDGRLRREGTEIVCEQCGLVSAEDAIDRGPEWRSFEDDDTDRRRTGAP
LTRSRHDRGLSTEIGYGSGSDSGYRSRLTGRKRRQIARLRREHNRARISSKAERNQVYGF
AEIRRITALLSLPDSTREQACVLFESAQSDGLFQGRSLEGFAAAAIYAICRTRSVPRTID
EIADVARADGDELEVAYDALNRELGLPTGPIDPTQYLPRYASKLDLGSAVERRAREHVDA
LLEAGLIGGRNPSGVAAGCLYKAAGERDEWPSLTQTAAAEVADVAAVTIRSTVTNINEL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcagattccgattcggctgcgatctgccccgagtgtgacggcagattacggagggag
ggtactgaaatcgtctgtgaacagtgcgggttggtctccgcggaagacgcgatcgaccgc
ggacccgaatggcggtcgttcgaggacgacgacaccgatcggcgtcgaaccggcgcgccg
ctcactcgctcgagacacgaccggggtctctcgacggagatcgggtacgggtccggctcg
gattcggggtaccgttctcggctcaccggtcgcaaacgccgacagatcgcccggctccgc
cgcgagcacaatcgtgcacggatctcttcgaaagcggagcgaaatcaggtctacgggttc
gccgaaatcaggcggatcaccgcgttgctctccctgcccgactccacgagagaacaggcc
tgtgtcctcttcgagtccgctcagtccgacgggctctttcagggccggtcgctcgagggc
tttgctgccgccgcgatctacgcgatctgtcggacgcgttcggtcccacggaccatcgac
gaaatcgccgacgtggctcgcgccgacggcgacgaactcgaggtcgcctacgatgcgctg
aaccgcgaactcgggctgccgacgggtccgatcgatcccacgcagtacctgccgcggtac
gcctcgaaactcgacctcggctcggccgtcgagcgccgcgcccgcgaacacgtcgacgcc
ctgctcgaggcggggttgatcggcggccgcaatcccagcggggtcgccgcgggttgtctc
tacaaggccgccggcgaacgggatgagtggccatcactcacccagaccgccgcggcggag
gtcgccgacgtcgcagcggtaacgattcggtcgaccgtgacgaacatcaacgaactctga
DBGET
integrated database retrieval system
