KEGG   Neorhizobium petrolearium: QEO92_06605
Entry
QEO92_06605       CDS       T09021                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
npm  Neorhizobium petrolearium
Pathway
npm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QEO92_06605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npm03019]
    QEO92_06605
Messenger RNA biogenesis [BR:npm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QEO92_06605
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Lactamase_B_3 Anti-Pycsar_Apyc1 Lipoprotein_2 Regulator_TrmB
Other DBs
NCBI-ProteinID: WGI69731
UniProt: A0ABY8M7J0
LinkDB
Position
1292970..1294637
AA seq 555 aa
MAKQEELVFLPLGGVGEIGMNLALYGYGTPQKRQWIMVDCGVTFPGPDLPGVDLVLPDIR
YLAGERHNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRNYEGSRADIP
VTIFKAGDRITVGPFQIEGVGVNHSIPEPMSLVIRTPLGNVVHTGDWKIDYAPSLGPLTD
EVRFRALGDEGVLAVMCDSTNAMRDGVSPSEEEVSEGLRKIIEGAEGRVAITTFSSNVGR
IRSVAQAAEAAGREVLLLGSSLKRVVDVARDVGLMEGLKPFIAEDEYGYIPRDKIVVILT
GSQGEPRAALAKIARDEMRNVALASGDTVVFSSRTIPGNEKAIIEIKNGLIEQGINVVTD
SDALVHVSGHPRRNELLKMYEWTRPQILVPVHGEAAHLMAQAELAASAGIKTIPRVRNGD
ILRLAPGPAEVVDEAPHGRIFKDGKLIGDFDEMGIGDRRKLSYVGHVSVNVLLDNRYDFL
TDPDVVAFGLPELDDEGEAMEDTLYDAVLGAVESIPRGRRKDLDMLREAVRRAVRAAANE
AWGKKPVVTVFVTRL
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcaaaacaggaagaactggtgtttctgccgcttggcggcgtgggtgagatcggcatg
aacctcgccctctacggctatggaacgccgcagaagcgccagtggatcatggtcgattgc
ggcgtcacctttccagggccggacctgccgggcgtcgatctcgttctgccggacatccgc
tatctcgccggcgagcgccataacctcaaggcgatcatcatcacccatgcgcacgaggat
cactacggcgcgctgaacgatctctggccgggcctcaacgtgccggtctatgcctcgccc
tttacggccggcatgctggaggcgaaacgcaattacgaggggtcgcgggccgatattccg
gtaacgatcttcaaagcaggcgaccgcatcacggtcggcccgttccagatcgaaggggtt
ggcgtcaaccactccattcccgagcccatgtcgcttgtcattcgcacgccgctcggcaat
gtggtccacaccggcgactggaagatcgattatgctccctcgcttggcccgctgacagac
gaggttcgcttccgtgcgcttggcgacgaaggcgttctggctgtgatgtgcgattcgacc
aacgccatgcgcgatggcgtgtctccgtcggaagaagaagtttcggaaggcctgcgcaag
atcatcgagggagccgagggcagggtggcgatcaccaccttctcctcgaatgtcggccgc
atccgttcggtcgcccaggccgccgaagctgccggtcgcgaggtgttgctgctcggcagc
tctctgaagcgtgtcgtcgacgtcgcccgcgatgtcggcctgatggagggcttgaaaccc
ttcatcgccgaggacgagtacggctatatcccgcgcgacaagatcgtcgtcatcctgacc
ggcagccagggcgaaccgcgcgccgcacttgccaagatcgcccgcgacgagatgcgtaac
gtggcgctggcatccggcgacacggtggttttctcctcgcgcaccattcccggcaacgaa
aaggcgatcatcgagatcaagaacggcttgatcgagcaaggcatcaacgtggtgacggat
tcggatgcgctggtgcatgtctccggtcatccgcgccgcaatgagctcctgaagatgtac
gaatggacccggccgcagatcctcgtgccggtgcatggcgaggcagctcacctgatggcg
caggccgagcttgcggcatccgccggcatcaaaacgatcccgcgtgttcggaacggcgat
attctgcggcttgcgccgggtcccgcggaggtggtcgacgaggcgccgcatggccgcatc
ttcaaggacggcaagctgattggcgacttcgacgaaatgggaattggcgatcgccgcaag
ctctcctatgtcggacatgtctcggtcaatgtgctgctcgacaaccgctacgatttcctg
accgatccggatgtcgtcgccttcggcctgccggaactcgacgacgaaggggaggcaatg
gaggatacgctctatgacgcggtgctcggcgcggtcgagagcattccgcgaggccgtcgc
aaggacctcgatatgttgcgggaggcggttcgccgcgcggtgcgcgccgctgccaacgag
gcctggggcaagaagccggtcgtgacggtgttcgtgacgaggttgtga

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