Neorhizobium petrolearium: QEO92_06605
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Entry
QEO92_06605 CDS
T09021
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
npm
Neorhizobium petrolearium
Pathway
npm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEO92_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npm03019
]
QEO92_06605
Messenger RNA biogenesis [BR:
npm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QEO92_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Lactamase_B_3
Anti-Pycsar_Apyc1
Lipoprotein_2
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
WGI69731
UniProt:
A0ABY8M7J0
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All DBs
Position
1292970..1294637
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AA seq
555 aa
AA seq
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MAKQEELVFLPLGGVGEIGMNLALYGYGTPQKRQWIMVDCGVTFPGPDLPGVDLVLPDIR
YLAGERHNLKAIIITHAHEDHYGALNDLWPGLNVPVYASPFTAGMLEAKRNYEGSRADIP
VTIFKAGDRITVGPFQIEGVGVNHSIPEPMSLVIRTPLGNVVHTGDWKIDYAPSLGPLTD
EVRFRALGDEGVLAVMCDSTNAMRDGVSPSEEEVSEGLRKIIEGAEGRVAITTFSSNVGR
IRSVAQAAEAAGREVLLLGSSLKRVVDVARDVGLMEGLKPFIAEDEYGYIPRDKIVVILT
GSQGEPRAALAKIARDEMRNVALASGDTVVFSSRTIPGNEKAIIEIKNGLIEQGINVVTD
SDALVHVSGHPRRNELLKMYEWTRPQILVPVHGEAAHLMAQAELAASAGIKTIPRVRNGD
ILRLAPGPAEVVDEAPHGRIFKDGKLIGDFDEMGIGDRRKLSYVGHVSVNVLLDNRYDFL
TDPDVVAFGLPELDDEGEAMEDTLYDAVLGAVESIPRGRRKDLDMLREAVRRAVRAAANE
AWGKKPVVTVFVTRL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaggaagaactggtgtttctgccgcttggcggcgtgggtgagatcggcatg
aacctcgccctctacggctatggaacgccgcagaagcgccagtggatcatggtcgattgc
ggcgtcacctttccagggccggacctgccgggcgtcgatctcgttctgccggacatccgc
tatctcgccggcgagcgccataacctcaaggcgatcatcatcacccatgcgcacgaggat
cactacggcgcgctgaacgatctctggccgggcctcaacgtgccggtctatgcctcgccc
tttacggccggcatgctggaggcgaaacgcaattacgaggggtcgcgggccgatattccg
gtaacgatcttcaaagcaggcgaccgcatcacggtcggcccgttccagatcgaaggggtt
ggcgtcaaccactccattcccgagcccatgtcgcttgtcattcgcacgccgctcggcaat
gtggtccacaccggcgactggaagatcgattatgctccctcgcttggcccgctgacagac
gaggttcgcttccgtgcgcttggcgacgaaggcgttctggctgtgatgtgcgattcgacc
aacgccatgcgcgatggcgtgtctccgtcggaagaagaagtttcggaaggcctgcgcaag
atcatcgagggagccgagggcagggtggcgatcaccaccttctcctcgaatgtcggccgc
atccgttcggtcgcccaggccgccgaagctgccggtcgcgaggtgttgctgctcggcagc
tctctgaagcgtgtcgtcgacgtcgcccgcgatgtcggcctgatggagggcttgaaaccc
ttcatcgccgaggacgagtacggctatatcccgcgcgacaagatcgtcgtcatcctgacc
ggcagccagggcgaaccgcgcgccgcacttgccaagatcgcccgcgacgagatgcgtaac
gtggcgctggcatccggcgacacggtggttttctcctcgcgcaccattcccggcaacgaa
aaggcgatcatcgagatcaagaacggcttgatcgagcaaggcatcaacgtggtgacggat
tcggatgcgctggtgcatgtctccggtcatccgcgccgcaatgagctcctgaagatgtac
gaatggacccggccgcagatcctcgtgccggtgcatggcgaggcagctcacctgatggcg
caggccgagcttgcggcatccgccggcatcaaaacgatcccgcgtgttcggaacggcgat
attctgcggcttgcgccgggtcccgcggaggtggtcgacgaggcgccgcatggccgcatc
ttcaaggacggcaagctgattggcgacttcgacgaaatgggaattggcgatcgccgcaag
ctctcctatgtcggacatgtctcggtcaatgtgctgctcgacaaccgctacgatttcctg
accgatccggatgtcgtcgccttcggcctgccggaactcgacgacgaaggggaggcaatg
gaggatacgctctatgacgcggtgctcggcgcggtcgagagcattccgcgaggccgtcgc
aaggacctcgatatgttgcgggaggcggttcgccgcgcggtgcgcgccgctgccaacgag
gcctggggcaagaagccggtcgtgacggtgttcgtgacgaggttgtga
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