Neorhizobium petrolearium: QEO92_06865
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Entry
QEO92_06865 CDS
T09021
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
npm
Neorhizobium petrolearium
Pathway
npm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEO92_06865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npm03019
]
QEO92_06865
03009 Ribosome biogenesis [BR:
npm03009
]
QEO92_06865
Enzymes [BR:
npm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QEO92_06865
Messenger RNA biogenesis [BR:
npm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QEO92_06865
Ribosome biogenesis [BR:
npm03009
]
Prokaryotic type
rRNA processing factors
QEO92_06865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WGI69777
UniProt:
A0ABY8M5L4
LinkDB
All DBs
Position
complement(1342886..1345771)
Genome browser
AA seq
961 aa
AA seq
DB search
MADKMLIDASHEEETRVVVVRGNRIEEFDFESQHKKQIRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPLADRQALMQQEAEDQRKIAEAESADPVIDLANEEQPDI
GIAAGPGESEQPAETVAEEAEPVQAEAATGEEAEKPKAKPKRSRSRKKVVEAVAEDTTSE
GETATVSNSDDEGSTPGEMAAMVDTDTISEDVDSRHRRDDDDDDDDDGHEKEVIESVGAE
DAMEEVPDRVVRKPRKQYRIQEVIKRRQILLVQVAKEERGNKGAALTTYLSLAGRYSVLM
PNTARGGGISRKITSPQDRKRLKEIARELDVPQGMGVILRTAGANRTRVEIKRDFEYLMR
LWENVRTLTLNSTAPCLVYEEGSLIKRSIRDLYNKDISEIIVSGEEGYREAKDFMKMLMP
SHAKVVQPYRDLHPIFSRSGIEAQLDRMLQPQVTLKSGGYLIMNQTEALVAIDVNSGRST
REHSIEETALQTNLEAAEEVARQLRLRDLAGLIVIDFIDMEEKRNNRAVEKKLKDCLKND
RARIQVGRISHFGLLEMSRQRIRASVLESTTQICTHCGGTGHVRSQSSVALHVLRGVEEY
LLKNTTHDINVRTTPDIALYLLNQKRATVTDYEKRFGVSIFIESDVSIGSSHFAIDRGEP
VENPVKIESLMQLAALPVEDEDDYVIESDEEEDEEVVEVQAASPQDRAQPGEEQGGRKRK
RRRRRRGRNGDRGGEAQAAPTGSEDDAITDEDEGDDGEDDLPETTATSDDQGDEGSQRKR
RRRGKRGGRRNRNGDEIPELNGSDEGAEADGSEEGETVGAMEAPEEVAVEAVQASPETEE
APASKTTAKPRRSRRGKASATADTEASPMEEATAPVEVVVEQVEAALGVEPEAAAEATAE
ESPLSEVEQADAGDAKPSRANRASNISSSAEAVVKSSEAATSNGEPTKPKKAGWWQRRGF
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaatgcttatcgacgcgtctcacgaagaggagacgcgcgtagtcgtcgtt
cgcggcaaccgcatcgaagagttcgatttcgaatcacaacataagaagcagatacgcggc
aatatctatctggcgaaggtgacgagggtcgaaccctccctgcaggccgcttttgttgac
tacggcggcaaccgccacggttttctggctttcgccgagatccatcccgactattatcaa
ataccgctggccgaccgtcaggccctaatgcagcaggaggcggaggaccagcgcaagatc
gccgaggccgaatctgccgatccggtgatcgatctcgccaacgaggaacagccggacatc
ggcatcgccgccggaccgggcgagagtgaacaaccggccgagacggttgcggaagaagcc
gagccggtccaagcagaggcagcaaccggcgaagaggcggaaaagccgaaggcgaagccg
aagcgcagccgctcccgcaagaaggtggtggaagctgtcgccgaagacacaacgtccgag
ggcgaaacggccaccgtttccaatagcgacgacgaaggctccacgcccggtgaaatggcc
gccatggtcgataccgatacgatctcggaagatgtcgatagccgtcatcgtcgcgatgac
gatgacgacgacgatgacgacggccatgagaaggaagtgatcgaatcggtcggcgccgaa
gatgcaatggaagaggttccggaccgcgttgtccgcaagccgcgcaagcaataccgcatc
caggaagtcatcaagcgccgccagatcctgctcgtccaggttgccaaggaggaacgcggc
aacaagggcgcagcgctcaccacctacctctcgcttgccggccgatattccgtactgatg
ccgaacacggcacgcggcggcggcatttcccgcaagatcaccagcccgcaggatcgcaag
cgcctgaaggaaatcgcccgcgagctcgacgtgccgcaaggcatgggcgtcatcctgcgt
accgccggtgccaaccgtacccgcgtcgagatcaagcgcgacttcgaatacctgatgcgt
ctgtgggaaaacgtccgtacgctgacgctcaattcgaccgccccatgcctagtctacgag
gaaggttcgctgatcaagcggtcgatccgcgatctctacaacaaggatatttccgagatc
atcgtttccggcgaggaaggctatcgtgaagcaaaagacttcatgaagatgctgatgccg
agccatgccaaggtggtccagccctatcgcgacctgcatccgatcttctcgcgctccggc
atcgaagcacagctcgaccgaatgctgcagccgcaggtgacgctgaagtccggcggctac
ctcatcatgaaccagaccgaagcactcgtcgccatcgacgttaactccggccgctcgacc
cgcgaacattcgatcgaggagaccgcgctccagacgaacctggaagcggcggaagaagtg
gcacgccagcttcgcctgcgcgaccttgccggcctcatcgtcatcgacttcatcgatatg
gaggagaagcgcaacaatcgcgccgtcgaaaagaagctcaaggattgcctgaagaacgat
cgcgcccgcatccaggtcggtcgtatctcgcatttcggcctgctcgaaatgtcgcgccag
cgcattcgcgcttccgtgcttgaatcgacgacgcagatctgcacgcattgcggcggcacc
ggccatgtgcgctcacagtcgtccgtcgccctgcatgtgcttcgcggtgtcgaggaatat
ctgctcaaaaataccacgcatgacatcaacgtccgcactacgccggatatcgcgctctat
ctgctgaaccagaagcgcgcgacagtgaccgattacgagaaacgtttcggcgtctcgatc
ttcatcgaatcggacgtcagcatcggctcgagccatttcgccatcgaccgaggcgaaccg
gtggaaaacccggtcaagatcgaaagcctgatgcagcttgcggcacttcccgtcgaagat
gaggatgactacgtcatcgagtcggatgaggaagaggacgaagaagtagttgaagtacag
gccgcgtctccccaggaccgtgcccagccgggtgaggaacagggcggacgcaagcgcaag
cgccggcgccggcgccgcggccgcaacggtgaccgtggaggcgaggcccaggccgcaccg
accggctccgaggacgacgccatcaccgacgaggacgaaggcgacgacggtgaggacgat
ttgcccgaaaccacagcaacgtcggacgaccagggggacgaaggctcacagcgcaagcgc
cgccgccgcggcaagcgtggtggccgccgcaatcgtaacggcgacgaaatccctgaactg
aacggttccgacgaaggtgcggaagccgatggatcagaggaaggtgaaaccgtgggggca
atggaagctcccgaggaagtcgctgtggaagccgtgcaggcatcccccgagacggaagag
gctccggccagcaaaaccaccgccaagccacgtcgctcccgtcgcggcaaggcctcagcc
acggcagacacggaggcatcccctatggaggaggcaaccgctccggtggaggttgtcgtc
gagcaggtcgaggctgcgttgggcgtggagcctgaagctgccgctgaagcgacggccgaa
gaatcccctctgtcggaagtcgaacaggccgatgccggcgatgcgaagccgagccgcgcc
aaccgcgcctcgaacatctcttcctcggccgaggccgtcgtgaaaagttccgaggcggca
acctcgaacggcgagccgacaaagcccaagaaagccggctggtggcagcgccgcggcttc
ttctaa
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