Neorhizobium petrolearium: QEO92_11055
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Entry
QEO92_11055 CDS
T09021
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
npm
Neorhizobium petrolearium
Pathway
npm03420
Nucleotide excision repair
npm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEO92_11055
03430 Mismatch repair
QEO92_11055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npm03400
]
QEO92_11055
Enzymes [BR:
npm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEO92_11055
DNA repair and recombination proteins [BR:
npm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEO92_11055
MMR (mismatch excision repair)
Other MMR factors
QEO92_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WGI70528
LinkDB
All DBs
Position
2172707..2175196
Genome browser
AA seq
829 aa
AA seq
DB search
MSNSFDDIPFFDEEPEPAPRKAPAPPPAGNAGLGIAARAMAARDQHRAPDYLSGLNPEQR
EAVETLDGPVLVLAGAGTGKTRVLTTRIAHILETGRAFPSQILAVTFTNKAAREMKERIG
VLVGGAVEGMPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVIRLIKQLIQAEGLDD
KRWPARQFAGMIDTWKNKGLLPADIPEGDARAFANGKGRELYAAYQARLKTLNACDFGDL
LLHPIAIFRQNPDILKDYHNRFRYILVDEYQDTNTAQYMWLRLLAQRPKGVPQNVCCVGD
DDQSIYGWRGAEVDNILRFEKDFPGARVIKLERNYRSTEHIIGAAGHLIAHNEGRLGKTL
FTDRVNPDDEKVIVHAAWDSEEEARAVGEEIERLQRGDSDGKKHALNDMAILVRASFQMR
EFEDRFVTLGLNYRVIGGPRFYERMEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDT
TVRYLHDYARARDIPMLQAAADIIETDELKPKARKALFDVVQSFRNWSQKLENTPHIELS
EQILEESGYTDMWKNDKSAEAPGRLENLKELIRSMEAFESMRGFLEHVSLVMDAEQNEDM
DAVSIMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRAGLEEERRLAYVGITRAKRR
CHIWFVSNRRIHGLWQSTMPSRFLDELPQMHVDVAVADTNYGGYGGGRGGYGQSRFDKAD
PFANTYSTPGWKRAQQNKTDATRDNWGTRSGHAVERIGYGESGPRGRTIEGELVAKSTTE
TPSQFSVGDRVFHIKFGNGNIAAIEGNKLTIDFDRAGQKRVLEGFVERV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagtttcgacgacatcccgtttttcgacgaggagcccgaaccggcgccgcgc
aaggcgcctgccccgccgcctgcgggaaatgccgggctcggcatcgcagcgcgcgccatg
gccgcccgggatcagcatcgcgcccccgattatctgtcaggcctcaacccggagcagcgc
gaggcggtcgagacgctggacggccccgtcctcgtgctcgcgggcgccggtacgggcaag
acgcgggtactgacgacacgcatcgcgcatatccttgagaccggccgggccttcccctcg
cagatattggccgtcaccttcaccaacaaggcggcccgcgagatgaaggagcgcatcggc
gtgctcgtcggcggcgcggtggaaggcatgccctggctcggcaccttccattcgatcggc
gtgaagctcctgcgccgccacgcggaactcgcagggctccgctccgacttcaccattctc
gacacggacgacgtcatccgcctcatcaagcagctcatccaggcggaggggctcgacgac
aagcgctggccggcccggcagttcgccggcatgatcgacacttggaagaacaagggcctg
cttcccgccgatatccccgaaggcgatgcgcgggccttcgcgaacggcaagggccgcgag
ctttacgccgcctatcaggcgcggctcaaaacgctgaacgcctgcgacttcggcgacctt
ttgctgcatccgatcgcgatcttccgccagaacccggatatcctgaaagattaccacaac
aggttccgctatatcctcgtcgacgagtaccaggataccaacaccgcgcaatacatgtgg
ctgcgcctgctcgcgcagcgaccgaagggcgtgccgcagaatgtctgctgtgtcggcgac
gacgaccagtcgatctatggctggcgcggcgcggaagtggacaatatcctgcgcttcgag
aaggattttccgggcgccagggtgatcaagctggagcgcaactaccgttccaccgagcat
attatcggcgccgccggccatctgatcgcccataacgaaggccgcctcggcaagacgctg
ttcaccgaccgggtgaaccccgacgacgagaaggtcatcgtgcatgccgcctgggattcc
gaagaggaggcccgcgccgtcggcgaggagatcgaacggctgcagcgcggcgattccgac
ggaaagaagcacgcgctgaacgacatggcgatcctcgtgcgcgcctccttccagatgcgc
gagttcgaagaccggttcgtgacgctcggcctcaactaccgcgtcatcggcggcccgcgc
ttctacgaacggatggaaatccgcgacgcgatggcctatttccggcttgtctgccagccg
gccgacgatctcgccttcgagcgcatcatcaacacgccgaagcggggattgggcgatacg
acggtgcgctatctgcacgactatgcccgcgcccgcgatatcccgatgctccaggctgcc
gcggatatcatcgagacggacgagctgaaacccaaggcgcgaaaagccctgttcgatgtc
gtgcaaagcttcaggaactggagccagaagcttgagaacacgccgcatatcgaactttcc
gagcagatcctcgaagagtccggttatacggacatgtggaagaacgacaaatccgccgaa
gcgccgggccggctcgaaaacctcaaggaactgatccgctcgatggaagccttcgagtcg
atgcgcggctttctggaacacgtgtcgctggtcatggatgccgagcagaacgaggatatg
gatgcggtgtcgatcatgacgctgcattccgccaaggggctcgaattcgaaacggtcttc
ctgcccggctgggaggaaggcctttttccccatcagcgggcgctcgacgaaggcggccgc
gcagggctggaggaggaacgccgcctcgcctatgtggggattacccgcgccaagcggcgc
tgccatatctggttcgtctccaaccgccgcatccacgggctgtggcaatccaccatgccg
tcacgcttcctcgacgaactgccgcagatgcatgtggacgtcgccgtcgccgatacgaat
tacgggggatatggcggcggacgcggcggttacggccaatcgcgcttcgacaaggccgat
cccttcgccaacacctattcgacccccggctggaaacgcgcccaacagaacaagaccgac
gccacccgcgacaactggggcacccgttccggccacgcggtggaacgcatcggctacggc
gaaagcggcccgcgcggccgcaccatcgagggcgagctggtggcgaaatccaccaccgaa
accccctcgcaattctccgtcggcgaccgggtattccacatcaagttcggcaacggcaat
atcgcggcgatcgagggcaacaagctgacgatcgattttgaccgggccgggcagaagcgg
gtgcttgaggggtttgtggagcgggtgtga
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