Neorhizobium petrolearium: QEO92_19945
Help
Entry
QEO92_19945 CDS
T09021
Name
(GenBank) choice-of-anchor D domain-containing protein
Organism
npm
Neorhizobium petrolearium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
ASH
SdrD_B
DUF4232
fn3_5
Motif
Other DBs
NCBI-ProteinID:
WGI67263
LinkDB
All DBs
Position
complement(4097197..4104681)
Genome browser
AA seq
2494 aa
AA seq
DB search
MALLGSVALPFDASADPGTPGVPQAPVAIYADNFQNRPGPTPIVKLNTYTSTSGQTYTAD
PKWLTNCNGWIASANQSTTAAGPAGATECTNTATWNTVQRLSWALGLHAGQTQATAQGNF
AVSAMTAGNPGAGLVEFQTATNIAFPTSNRFLTFSVDVAAVNCQVSPPLLQFSLVNEAGN
ATPAGTQINGCSSGTTQTPPALGGAPASTITTGTYTSNGAVLISGASFGIRMVNNNGSGT
GNDHAFDNVSVLDATPQLDKEFGPTSVAVGGVSTLTFTITNTSELGAKTGWSFTDALPVG
LRVASDEISTTCPSGVVTAAVGGSTIDVSGNLTAGMASCTATVPVTSSSAGTYTNDASNI
TSAVGINPPGSTSVTFGTQPNFVCDSTMYFGINAPTRLHRADTSTNPFTFPGIGAVNSPG
YNAMGYDVVSNYIYATRWDSTTSRYRLLRIGSNGSVSDQGPIVGGGINNGSGQVASGVVG
PDGYYYVKENSASNVMWRVDLTTRTATSIPLNRTISNADLAWHNGLIYTHDSTSGIFYSI
NPTTGAVTAIGQSGLSVDAFGSLISASNGIFGRYNSGGFYQFDLATGVATLISDAPSGAG
DGAKCPVTAVSLPADTQITKTDGSNTYTPGTNVTYTMVVSNSGPFGVQNASVNDPLPAGI
TGASWTCGGATNGGVCGTASGTGAISDVKVSLPAGSSVTFELTLTVPADFTGDLVNAATV
ANPSSVPDPDTSNNSATDTDTAAAPALTIEKTGTLNDLDGDGLIDAGETISYSFVVENTG
NVTLTDVTVDDPLLTNAGVSVSPGPQTLAPGGTATFTATYTPTQADIDAGQVSNTATGTG
TPPSGPPIDSPPDTVVVPPDQTPGLTIEKTGVLNDADGDGLIDLGETISYSFLVRNTGTV
TLTGVTVDDPLLANAGISVTPGPQTLGPGGTATFTATYTPTQTDIDAGQVENTAIGSGTP
PSGPPIDSPPDTVVVPPDQTPGLTIDKTGTLNDADGDGLIDLGETISYSFLARNTGSVTL
TGVTVDDPLLANAGISVTPGPQTLAPGGTATFTATYTPTQADIDAGRVENTATGTGTPPS
GPPIESPPDTVVVPPDQSTGLVIDKTGTLNDLDGDGLIDLGETISYSFQARNTGAVTLTN
VTVNDPLLTDAGIALDQGPQTLAPGATFTFTATYTPTQADIDAGRVENTATGTGTPPSGP
PIESPPDTVVVPPDQTPGLTIEKTGVLNDADGDGLIDLGETISYSFLVRNTGAVTMTGVT
VDDPLLANAGISVTPGPQTLAPGGTATFTATYTPTQADIDAGQVENTATGTGTPPSGPPI
DSPPDTVVVPPDQTPGLTIEKTGTLNDADGDGLIDLGETISYSFLVRNTGTVTMTGVTVD
DPLLTNAGVSVSPGPQTLAPGGTATFTATYTPTQADIDAGQVENTATGTGTPPSGPPTES
PPDTVVVPPDQTPGLTIEKTGRLNDADGDGLIDLGETISYSFLARNTGTVTLTNVTIDDP
LLTNAGISVTPGPQTLAPRGSVTFTATYTPTQADIDAGRVENTATGTGTPPSGPPIDSPP
DTVVVPPDQTSGLTIEKTGTLNDADGDGLLDAGETISYSFLVTNTGAVTMTNVTVNDPLL
ANAGISVSPGPQTVAPGGTVTFTATYTPTQAEIDAGQVENTATGTGTPPSGPPTESPPDT
VVVPPDQTPALTIEKTGTLNDVDGDGFIDLGETISYSFLVTNSGAVTMTNVTVDDPLLTD
AGISVTPGPQTLAPGGTATFTATYTPTQADIDAGRVENTATGTGTPPSGPPIDSPPDTVV
VPPDPASDLVIEKTGTLNDADGDGLLDAGETISYSFLVRNTGAVTMTNVTVNDPLLANAG
ISVTPGPQTLAPGGTATFTATYTPTQADIDAGRVENTATGTGTPPSGPPIESPPDTVVVP
PEQTQGLTIEKTGTLNDADGDGLLDAGETISYSFLVRNTGVVTLTNVTVNDPLLANAGIS
VTPGPQTLAPGGSATFTATYTPTQADIDAGRVENTATGTGTPPSGPPTESPPDTVVVPPQ
PASLKLQKTGRFTDTDRNSYTNTGDTVTYTFTVTNDGGQTITNVWPVDAGPTFNGRPAGA
SLSRFTPEPVTLAPGESQDFTAVYTLTQGDVENAAGIPDGIANSATASGRTPDGEVSSDN
STSVVTPPAAVPGDISVTKIANLRFIRRGEKAPFTIRVTNNSGARVDALTVIDTMPAGFR
YVEGSATVDGTKVTPEVVGRQIRFRDVSVGSKSTVEIQIRLLALSTAGPGEHVNLAHVVD
PSGDQVGNEARAVVEIIVEPVFDCGDIIGKVFDDTNRNGYQDEGEPGLPGVRIATVKGWL
ITTDQYGRFHVACADLPETRIGSNFIMKLDPRTLPTGYRLTTENPRVVRLTAGKMTELNF
GASIGRVVRLDLKGEAFVSGKAELDKRWADGIDQLITVLAQEQSVLRLSYIDAATEPELA
EARVRHIKELVADRWRQRKRAYPLNIETRVEAGQ
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
ttggccctgctcggcagcgtcgcgcttccgttcgatgcatcggcagatccgggaacgccc
ggcgttccgcaggctcccgttgcgatctatgcggataacttccagaaccggcccggcccc
accccgatcgtcaagctgaacacctacaccagcacttccggccagacctacacggccgat
ccgaaatggctgacgaactgcaatggctggatcgcctccgccaaccagtcgacaactgct
gccggcccagccggtgccacggaatgcacgaatacagcgacctggaacacggttcagcgc
ctttcctgggcgcttggacttcatgcaggccagacgcaggccaccgcacagggcaatttt
gcggtttcggccatgaccgcaggcaatcctggcgccggacttgtagagttccagacggca
acgaatatagcattccccacaagcaatcgtttcttgaccttcagtgtcgatgtcgcggcc
gtcaattgccaggtatctccgccgctgctgcaattctcactcgtgaacgaagcaggcaac
gctacgccggcaggcacgcagatcaacggctgctcaagtggaacgacacagacgccgcca
gcgctcggcggcgcgccggcttccacgattaccacgggaacctacacgtctaacggggcg
gtgctgatcagcggcgcctccttcggcatccgcatggtcaacaacaacggcagcgggacc
ggtaacgaccacgcgttcgacaatgtcagcgtcctcgatgcaacgccgcagctcgacaag
gagttcggcccgaccagcgtggccgtcgggggcgtgtcgaccctgacattcacgatcacc
aacaccagcgagttgggggcaaagaccgggtggtcgttcacggatgctcttccggtcggc
ctgagggtggcatccgatgagatcagcacgacctgcccatcgggtgtcgtgacggcagcc
gtcggtggatcgaccatagacgtctcgggaaatctcaccgccggcatggcttcgtgcacg
gcgaccgtgccggtaacgtccagttccgccggaacctataccaacgacgcatcgaacatc
acgtcggccgtcggcatcaacccgccaggcagcacctcggtcacgttcggcacccagccg
aacttcgtgtgcgattcgacgatgtatttcggaatcaatgcgcccacgcggcttcatcgg
gccgataccagcaccaatccgttcacctttcccggaatcggcgcagtgaacagccccggc
tacaatgcgatgggctacgacgttgtcagcaactatatttacgcgacgcgctgggacagc
accacgagcagataccgcctgttgcggatcggcagcaacggttccgtcagcgaccagggt
cccatcgtcggcggcggcatcaataacggttcggggcaggtagcctcgggtgttgtgggc
ccggacggctactactatgtgaaggagaactccgcctccaacgtgatgtggcgcgtggac
ctgaccacccggacggctaccagcattccgctcaaccgcacgatctcgaacgcggacctg
gcctggcacaacgggctcatctatacgcatgatagcacttcgggcatcttctattcgatc
aatccgacgacgggagcggtaactgccatcgggcagtcgggtctttccgtggacgcgttc
ggatcgttgatcagcgcctcgaacggtatctttggccgttacaatagcggtgggttctat
cagttcgaccttgcaacaggcgtggcgacactcatttcggatgcgccatcgggtgccggc
gacggtgccaaatgccctgtcacggctgtaagtcttcccgccgacacgcagatcaccaag
accgacggcagcaacacctatacgccgggcaccaacgtcacctacacgatggtggtctcg
aacagcggtccgttcggcgttcagaacgcgtcggtaaacgatccgctgcccgccggtatc
accggggcgagctggacttgcggcggcgcaacgaatggcggtgtctgtgggacggcgagc
ggcacaggcgccattagcgacgtcaaggtgagcctgcccgcaggcagctccgtcaccttc
gaattgaccttgacggtgccagcggacttcaccggcgatctggtgaacgccgctacggta
gccaatccctcgagcgtgcctgaccccgatacgagcaacaattcggcaacggacacggac
accgctgcggctccggcactgacgatcgagaagaccggcacgctcaacgacctcgacggt
gatgggctcatcgatgccggcgagacgatcagctacagctttgtcgtggagaataccggc
aatgtgacgctgaccgatgtcacggtggacgatccgctgctcacgaatgccggtgtttcc
gtgtccccaggcccgcagactttggcgcccggcgggacggcgacatttacggcgacctat
acgccgacacaggccgacatcgatgcaggacaggtgtcaaacaccgccaccggcaccggt
acgccgccgtccggcccgccgatcgacagcccgccggatacggtcgtcgtgccgccggac
caaacgccggggctgacgatcgagaagaccggcgtgctgaacgatgccgatggcgacggg
ctcatcgatctcggagaaacgatcagctactccttcctggtgcgtaacaccggtacggtg
acgctgaccggcgtgacggtggacgatccgctgcttgccaatgccgggatttcggtaacg
cccggcccgcagacgcttggacccggtggaaccgcgacctttacagcgacctatacaccg
acccagaccgacatcgatgcggggcaggtggagaacaccgcgatcggcagcggcacacca
ccgtccggcccgccgatcgacagcccgccggataccgttgtcgtgcctccggaccagacg
cccgggctgacgatcgacaagacgggtacgctcaatgatgccgacggtgacgggctcatc
gatctcggcgagacgatcagctactccttcctggcgcgcaacaccggttcggtgacgctg
accggcgtgacggtggacgatccgctgctcgccaatgccggcatatcggtcacgccggga
ccccagacgctggcgcccggcggaacggcgacgtttacggcgacctatacgccgacccag
gccgatatcgacgcgggccgcgtggagaacacggcgaccggcaccggcacgccgccatcc
gggccgccgatcgaaagcccgccggataccgtcgtggtccctccggatcagtcgaccggc
ctggttatcgacaagaccggcacgctgaatgatctcgacggtgacgggctcatcgatctc
ggcgagacgatcagctactcgttccaggcccgcaacaccggcgccgtgacgctcaccaat
gtgacggtgaacgatccgctgctcaccgatgccggcatcgcgctggatcaggggccgcag
acgctggcaccgggggcgaccttcaccttcactgcgacttatacgccgacccaggccgac
atcgatgcggggcgggtggaaaacacggcgacaggcaccggcacgccgccgtcaggtccg
ccgatcgaaagcccgcccgacacagtcgtggtgccgccggaccagacgccgggactgacg
atcgagaagacgggtgtgctgaacgatgccgatggcgacggcctcatcgatctcggcgag
acgatcagctactcgttcctggtccgcaataccggggcggtgacgatgacgggcgtgacc
gtcgacgatccgctgcttgccaatgccgggatttcggtaacgcccggtccgcagacgctg
gcgcccggcggaaccgctacctttaccgcgacctatacgccgacccaggccgatatcgat
gcgggccaggtcgagaacacggcgaccggcaccggcacgccgccgtccggcccgccgatc
gacagcccaccggatacggtcgtggtgcccccggaccagacgcccggactgacgatcgag
aagaccggcacgctgaacgatgccgatggcgacggcctcatcgatctcggagaaacgatc
agctactcgttcctggtccgcaacaccggcaccgtgaccatgacaggcgtgacggtggat
gatccgctgctgaccaatgccggcgtttccgtgtccccaggtccgcagacgctggcgccc
ggcggaacggcgacctttaccgcgacctatacaccgacccaggccgatatcgacgcgggc
caggtcgagaacaccgcgaccggtaccggcacgccgccgtccggcccgccgacggagagc
ccgcctgacaccgttgtcgtgcctccggaccagacgcccggattgacgatcgaaaagacc
ggcagactcaatgatgccgatggcgacgggctcatcgatctcggcgagacgatcagctac
tccttcctcgcccgcaataccggcaccgtgacgctcaccaatgtcaccatcgatgacccg
ctgctaaccaatgccgggatttcggtcacgccgggaccgcagacgctggctccgcggggg
agtgtcaccttcacggcgacctatacgccgacgcaggccgatatcgacgcgggccgcgtg
gagaacaccgcgaccggcaccggcacgccgccgtccgggccaccgatcgacagtccgcct
gacaccgttgtcgtgccgccggaccagacgtccggactgacgatcgaaaaaaccggcacg
ctgaacgatgccgacggtgacggtcttctcgatgccggagaaacgatcagctactcgttc
ctcgtcaccaatacgggtgccgtgacgatgacgaatgtcacggtcaacgatccgctgctc
gccaatgccgggatctcggtgtcacctggcccgcagacggtggcgcctggtggaacggtg
acgtttactgccacctatacgccgacccaggcggagatcgatgcgggccaggtcgagaac
acggcgaccggtaccggcacgccgccatccggcccgccgacggagagcccaccggatacc
gtcgtggtccctccggaccagacgcccgcactgacgatcgaaaagaccggcacgctcaat
gatgtcgatggcgacgggttcatcgatctcggagagacgatcagctactccttcctcgtc
accaacagcggtgccgtgacgatgacgaatgtcacggtcgacgatccgctgctcaccgat
gccggcatatcggtcacgccgggaccccagacgctggcgcctggcggtacggcgaccttc
acggcgacctatacgccgacccaggccgacatcgacgcgggccgtgtcgagaacaccgcg
accggtaccggaacgccgccttccgggccgccgatcgacagcccgcccgacaccgtcgtt
gtgccgcccgatccggcatcggatctcgtgatcgaaaagaccggcacgctgaacgatgcc
gatggcgacggccttctcgatgccggggaaacgatcagctactcgttcctggtgcgcaac
accggggcggtgacgatgaccaatgttacggtcaacgatccgctgctcgccaatgccggc
atatcggtcacgccgggaccccagacgctggcgcccggcggaacggcgaccttcacggcg
acctatacgccgacccaggccgacatcgacgcgggtcgtgttgaaaacaccgcgaccggc
acgggcacgcctccgtccgggccgccgatcgaaagcccgccggataccgttgtcgtgcct
ccggagcagacgcagggactgacgatcgagaagacaggcactctcaacgatgccgatggc
gacggtcttctcgatgccggcgagacgatcagctactcgttcctggtccgcaataccggt
gtcgtgacgctgaccaacgtcacggtcaacgatccgctgctcgccaatgccggcatatcg
gtcacgccgggaccccagacgctggcgcccggcggcagcgcgacgtttacggcgacctat
acgccgacccaggccgatatcgacgcgggccgtgttgagaacaccgcgaccggcaccggc
acgccgccatccggcccgccgacggagagcccgcccgacaccgttgtcgtgccgcctcag
cctgccagcctgaaactgcagaagaccggccgcttcaccgatactgatcgaaacagctat
acgaacactggtgatacggtgacctataccttcacggtcaccaacgacggcgggcagacg
atcaccaatgtctggccggtagatgcagggcctaccttcaatgggcgaccagccggagct
tccctgtccaggttcacaccggaacctgtcacattggctcccggcgaaagtcaggacttc
actgcagtctacacgctgacgcagggagatgtcgaaaacgcggcgggcatcccggatggc
atcgccaactctgccacagcaagcggtcgcacccccgacggcgaagtcagttcggacaat
tccacgtccgttgtcacaccgcccgcagccgttccaggtgacatttccgttacgaagatt
gccaacctcaggttcatccgtcgtggtgaaaaggcaccgttcaccatccgcgtcaccaac
aactcgggcgcgcgggtggatgctctgacggtcatcgacacgatgccggcaggcttccgc
tatgtggaaggctcggcgaccgtcgacggcaccaaggtgacgcctgaagtggtcggccga
caaatccgcttccgcgacgtgtccgtcggcagcaaatccacggtcgagattcagatcagg
ctgctggcgctgagcacggccgggccgggtgagcatgtgaaccttgcccatgtcgtggat
cccagcggcgatcaggtcggcaatgaagcccgcgcggtcgtcgagatcatcgtcgaaccg
gtcttcgactgcggcgacatcatcggcaaggtgttcgatgataccaaccgcaacggctat
caggacgagggcgagccgggactccccggcgtaaggatcgcgacggtcaagggctggttg
atcaccaccgaccagtatggccgcttccatgtcgcctgcgcggatcttcccgagacacgc
atagggtcgaacttcatcatgaagctcgatcccagaaccctgccgaccggctaccgcctg
acgacggaaaacccgcgtgtcgtacgcctgacggccggcaagatgaccgagctcaacttt
ggggcttcgatcggccgcgtggtccggctcgacctcaagggcgaagccttcgtgtcagga
aaggccgaactcgacaagcgctgggcggatggcatcgaccaactgataaccgtcctggct
caagagcagtcggtgctccgtctctcctacatcgatgcggccactgagcccgaactcgcc
gaggcgcgcgtgcgccacatcaaggagctggttgccgaccgatggcggcagcggaagcgg
gcctatccgctcaacatcgagacgcgcgtggaggcgggacaatga
DBGET
integrated database retrieval system
