Neorhizobium petrolearium: QEO92_25755
Help
Entry
QEO92_25755 CDS
T09021
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
npm
Neorhizobium petrolearium
Pathway
npm03030
DNA replication
npm03410
Base excision repair
npm03420
Nucleotide excision repair
npm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QEO92_25755 (polA)
03410 Base excision repair
QEO92_25755 (polA)
03420 Nucleotide excision repair
QEO92_25755 (polA)
03440 Homologous recombination
QEO92_25755 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npm03032
]
QEO92_25755 (polA)
03400 DNA repair and recombination proteins [BR:
npm03400
]
QEO92_25755 (polA)
Enzymes [BR:
npm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QEO92_25755 (polA)
DNA replication proteins [BR:
npm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QEO92_25755 (polA)
DNA repair and recombination proteins [BR:
npm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QEO92_25755 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEO92_25755 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
NYN_YacP
IMS_HHH
Taq-exonuc
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WGI68321
LinkDB
All DBs
Position
5353382..5356372
Genome browser
AA seq
996 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLTDARDTSVGVT
PTHFAVIFDYSAKTFRKDIYDAYKANRQAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTVVSSDKDLMQLVTPMVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQALVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAGEIKQVKRRENIVANA
DQARLSRQLVSLRTDVPLDLALHALVLEPQNGPKLIAFLKAMEFTTLTRRVAAACDCNAE
EIEPAVLKIEWGERARGPDLDAGVPAKAPIDTGEAAAEAPASLPKAAIAKGVGAATPAEL
AQARIEVFAKAKLDPSCYVTVRDVEVLDDWIRAAQETGLVGFDTETTSLDPMQAELVGFS
LAIADNTDNPTGLAVRAAYVPLIHKTGVGDLLGGGLAENQIPTSEALARLKPLLEDPSVL
KVAQNLKFDYLVMKRHGITVESYDDTMLMSYVLEAGKANHGMDALSERWLNHKPIAFKDV
AGSGKSGVTFDYVDIDKATAYAAEDADVTLRLWMVLKPQLAAMGLTTVYERLERPLVEVL
ARMEERGITIDRQILSRLSGELAQKAAAFEDEIYQLAGEKFTIGSPKQLGDILFGKMGLP
GGAKTKTGQWSTSASVLEDLAATGHELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRVH
TCYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLVSADYSQIELRVLAH
VADIPQLRQAFSDGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQ
LGIERSEAGDYIKRYFERFPGIRDYMESTKSFARENGYVETIFGRRAHYPEIKSSNPSVR
AFNERASINAPIQGSAADIIRRAMVKMEHALAKAGLSARMLLQVHDELIFEVEDEEIERT
LPVIISTMEQAAMPAIAMKVPLKVDARAAGNWDEAH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatcttttccttgtcgacggttccggcttcatcttccgtgcgttc
cacgcgttgccgccgctcactcgtaaatccgacggcctgccggtcggcgccgtctccggc
ttctgtaacatgctctggaagctgctgaccgatgcgcgtgacacatccgtcggtgtgacg
ccgacgcacttcgcggtcatcttcgattattccgcgaagaccttccgcaaggacatctat
gacgcctataaagccaaccggcaggcgccgcctgaagagctcatcccgcaattcgggctg
attcgcgaggccacccgcgccttcaacctgccttgcatcgagacggaaggtttcgaggcg
gacgacatcatcgccacctacgcgcgtcaggccgaggcgatcggagccgacgtgacggtc
gtctcctcagacaaggacctgatgcagctcgtgacgccgatggtccacatgtatgacagc
atgaaggacaagcagatcggcattccggacgtcatcgagaaatggggtgtgccgccggaa
aagatgatcgacctccaggccctggtcggcgattcggtggacaacgtgccgggtattccg
ggcatcggtccgaagacggccgcacagcttctcgaggaattcggcgatctcgatacgctg
cttgcccgtgccggcgagatcaagcaggtgaaacggcgggaaaacatcgttgccaatgcc
gaccaggcgcgcttgtcgcgccagctcgtgtcactcaggaccgacgtgccgctcgacctg
gccctccatgcgctggtgctggagccgcagaacggcccgaagctgatcgccttcctaaag
gccatggagttcaccacgctgacccggcgcgtggcggcggcctgcgattgcaatgccgag
gagatcgaaccggccgtcctgaagatcgaatggggagagagggcccgcggaccggatctc
gatgccggggttccggcgaaagcgccgatcgataccggcgaggccgcggccgaagcgccg
gcgagtctccccaaggcggccatcgcaaagggtgtcggggctgcaacgcccgccgaactg
gcgcaggcccgcatcgaggtttttgccaaggccaagctcgacccgagttgctatgtgacg
gtccgcgatgtcgaggtgctcgacgactggatccgggcggcgcaggagacaggcctcgtc
ggcttcgatacggaaaccacttcccttgatccgatgcaggcggaactcgtcggcttctcg
ctggcaatcgccgacaataccgataatccgaccggccttgccgttcgtgcggcctatgtg
ccgctgatccacaagacgggagtgggtgacctgctcggcggaggacttgcggagaaccag
attccgacatccgaggcgcttgcccgcctgaaaccgctgcttgaagatccatcggtcctc
aaagttgcccagaacctgaagttcgattatctggtgatgaagcgccacggcatcacggtc
gaaagctacgacgacacgatgctgatgtcctatgtcttggaggccggcaaggccaaccac
ggcatggacgcgctttcggaacgctggctgaaccacaagccgattgccttcaaggatgtc
gccggcagcggcaagtcgggcgtgacttttgactatgtcgacatcgacaaggcgacagcc
tatgcggcggaagatgccgatgtgacgctgcgcctctggatggtcttgaagccgcaactg
gctgccatgggtctgaccaccgtctacgaacggctggaacggccgctggtcgaagtcctg
gcgcgcatggaagagcgcggcatcacgatcgaccggcagatcctctcgcgcctttccggc
gagcttgcccagaaggcggctgctttcgaagacgaaatctatcagctcgcgggcgagaag
ttcaccatcggctcgccgaagcaactcggtgatatcctgttcggcaagatgggcctgccg
ggcggagccaagaccaagaccggccaatggtcgacgtcggcgagcgtgttggaagacctt
gcggctacaggccatgaactgccgcgcaagatcgtcgactggcggcagctcaccaagctg
aagtccacctatacggatgcgctgccgggctatgtccatcccgagacgaaacgggtccat
acctgttattcgctggcgtccaccacgaccgggcgcctttcgtcctccgagccgaacctg
cagaacatcccggtacgcacggcggaaggacgaaaaatccgcacggcgttcatctcgacg
cccggccacaagctcgtctcggccgactacagccagatcgagctgcgcgtgctcgcccat
gtcgccgatattccgcaattgcggcaagccttttcagacggtatcgacatccatgccatg
accgcgtccgaaatgttcggcgtgccggtggaaggcatgccgagcgaggttcgccgccgc
gccaaggcgatcaatttcggcatcatctatggcatttccgccttcgggcttgccaaccag
ctcggcatcgaacgttcggaagcgggcgactacatcaagagatatttcgagcgcttcccg
ggcatccgcgactatatggagagcaccaagagttttgcgcgagagaacggctatgtggag
acgatcttcggccgccgagcgcattatccggagatcaagtcctccaatccctccgtgcgg
gcattcaacgaacgggcatcgatcaacgctccgatccagggttcggcagcggatatcatc
cgccgcgccatggtgaagatggagcacgcgctcgcgaaagcgggcctgtcggcgcgcatg
ctcctgcaggtgcacgacgaattgatcttcgaagtcgaggatgaggagattgaacggacg
ctgccggtgatcatttcgaccatggagcaggcggccatgccggcgattgccatgaaagtg
ccgctgaaggtggatgcgcgtgcggcgggcaactgggacgaggctcactga
DBGET
integrated database retrieval system
