Neorhizobium petrolearium: QEO92_28470
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Entry
QEO92_28470 CDS
T09021
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
npm
Neorhizobium petrolearium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TcdB_toxin_midN
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
WGI72076
LinkDB
All DBs
Position
unnamed1:331992..338273
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AA seq
2093 aa
AA seq
DB search
MRDSRVRFAALAATVSLCVLSGGVTGAVLLDGMFGGVAFAGEQGPAGGGFGSGGSGFGNG
GLGGSSVEAGQGGSAGASGGQVVQPDGSGVSSDDRAVDRAQAIGQGSGANGKGVGGQDEA
GQANGTALGKPADDDGEGEEPQADKADAEATDENAAEPQAMTAMAAAATSQEAPAVNAPE
RPSVPEIGGNGFFTQKIAIDVPAFRGLEPKIALSYSSARKTRLGGLYQGWLGYAWGLDGF
DVIERASPGYGYPYFDANDVYLLNGEELVACAEGMVAASCTAGGTHVTENENFKRVSFDA
AANTWTVTDRDGTVSLFKSVMAIAGTSPASGTTDYKLQHDGRYLLTQVKDTNGQVVNYGY
SCPDLPGCYAKSISYSGAGITFYYEDRPDFLVMANGLSLSYTKKRVKTISVKVGTAVRNV
YALTYDQAPFSNTSRLVKVDRYGKDATVAADGTITGTTVKTIRQMTYDNLAYSYAAKPGV
TGGRVTEYGGFPSAQAGSIDLNADGRDELYGWVADTSQCGEVNCDAEYLSPRRSWRFTKF
ADDGTAAGIGVNFPKPPSTGPSDSTSLEVEFSSGRFAAERPRDLGFKFKWRVTSFTPEEG
TTHTDYKENRAGRADANLNISLGACSSTYAAVCALLTEGGSVLDHDGDGLDTRINFSKPL
VGKTDFAGNGRQGVLAAANDAENFRFVNGAWAASASGVQCKNEGRTGNRCVLGDLNGDGA
TDILQFLGEPGGDYKLVVYLSTGKSFVRVANGEIFGSPLLLDVDNDGRVEVLGPKNRSQN
LARPTRMPWRLAFTASGAQWLVDVKDFDQNIAFGDFNGDGLPDLVSGDGKTYVSNPGAGN
PNLLRTVKFETGGSVAVDYTPSTRWTNVYMPQVLHAVTKLTVSDGRTTAAVTDYAYAGGL
YDPKARKFLGYKTITVTKPLAWGETTRPVVEITYRQDLASYGLPAQTVSRDAANTASKKV
VETYAVNAATKPYRALNTRTDTTLTEGSTSLVLRKDRIFDAYGNITQLRDVGRTDLTGDE
TWTVTSYAPNTTAYIVSLPRQRNVRSGGFSTSTDVYERHQAFYYDGSTDNAAPPAKGNLT
ILRSYKSVEPTSASYLEYFTFDAYGNRLSHVDGVGNRTEWDYDATYHLHVVKERAPKYFV
LGGLPADTRFVTSYTPDYVCGKPASKVDWNGVKETFTYDAYCRPYGYTNAGTGKYVNTRY
IDEGIPATQSVVVYEPLATGSGNVYTRTYYDGLARQWRVQTPPDVAGGATRVTDTRYDAR
GNVGQTAATRFSNEASRLTVNYYDWNDRVVKVVNPDASQRTYAYNVQPATAVGGTTNLPV
MEMRMSDEEGKVRRTYTDKDNNVILTSGNLSGTWVNESRTYDVMGRLRGVRDHSGATWTY
TYDLVGNRLTASDPDLGNWSYTYDNANRLVSQTDARGAVTTLAYDQMGRLRTKSVKGAGE
TAATVTATNTYDTAEAGVGAAPFHDVGLLTVSSNGFAKHSYSRSLTGSGTKLTTKTVIDG
ITHTTVETRGRAGLTLAIAYSPAAVNVGTASAPWTYNISNRLLTVPGHITAATYEADGQT
TSISYANGVSTTFAYAPERRWLTRVTTKKGTTVLMDNQYTVRDKLGRIKAITGLTTADSW
TYTYDDLGRLTKADNLGNNTLDETYSYSVTGNLTSRTKMGTYTYPAGTAARPHAATKIGT
KTLSYDANGNMLSDGTRTLVWDRSNLLGSVTQSGSAVTFAYGPDGARAMKTWAFGKTLYA
SADVEIDRTTPGAEIYTRYPHPDLKVTTTAAGATTKSYLHRDHLASVRLVTNDTGTPAEQ
TAYAAYGQPTNTAMQTRKGYIGERFDAETGLMYLNARYYDPAFGRFISPDDWDPTIDGVG
TNRYAYAQNDPVNNSDPNGHSISPDISKLDSEGTGGDSGSDNEQTEPQTQASKDITEAAK
DLQPNQRDKKEEDADQALMGYARVDEHGSGMVGLSGADAIDASTRSSGGVHQQIGHSPTV
IDPILLDGRGGRSGIEGHGLINTNSGSGSNSSVADRIARDGNISIELAQQVTGISRHGIN
QVINRGVGPSAILDALRNPLKIVPRSNGTTQYRGADATVVINPEGNIVTVWPQ
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgcgagatagtcgggtaaggtttgcggctttggccgccacggtatcgctttgcgttttg
tcgggtggggtgacgggagcagtgctgctggatgggatgttcggcggtgttgcgtttgcc
ggcgaacaggggccggcgggcggcggcttcggcagtggcgggagtggcttcggcaacggt
ggtctcggcgggagttccgtggaggcggggcagggtggatctgccggcgcttcgggcggt
caggtcgtgcagccggatggctccggcgtttcttccgacgatcgggcggtggaccgggcc
caggcgatcggccagggctcgggcgccaacggcaagggcgtcggcggtcaggacgaggcc
ggtcaggcgaacggcacggcgctcggcaagccggccgatgatgacggcgaaggcgaagag
ccgcaggctgacaaggcggatgccgaggcgacggacgagaatgccgcagaaccgcaggcg
atgacggcgatggcggcggcggcaaccagccaggaagcaccggcggtcaacgcgccggaa
aggccatcggtgccggagatcggcggcaacggcttcttcacccagaagattgccatcgac
gtccctgcctttcgcggcctggagccgaagatcgcgctttcctacagttctgcccgcaag
acgaggctgggcggcctttaccagggctggctgggctatgcctgggggctcgacggtttc
gatgtgatcgagcgggcaagtccgggttatggctatccctatttcgatgccaatgacgtc
tatctgctgaacggcgaggaactggtggcctgcgccgagggcatggtggcggcctcgtgt
acggccggcggcacgcatgtgacggagaacgagaacttcaagcgggtgagcttcgacgcg
gcggccaacacctggacggtgaccgaccgggacgggacggtgtcgctgttcaagtcggtg
atggcgattgccggcaccagcccggcctcgggcacgacggactacaagctgcagcacgac
gggcgctatctgctgacccaggtgaaggacaccaacgggcaggtggtcaattacggctat
agctgcccggacctgcctggctgctatgccaagtcgatcagctattcgggtgcggggatc
acgttctattacgaggaccgtcccgacttcctcgttatggcgaacggcttgagcctgtcc
tacacgaagaagagggtgaagacgatctcggtgaaggtggggacggcggtccggaacgtc
tatgccctgacctacgaccaggcgccgttctccaacacgtccaggctcgtcaaggtcgac
cgttacggcaaggatgccactgtcgccgcggacggcaccatcaccggcaccaccgtcaaa
accatccggcagatgacctacgacaacctggcgtacagctatgccgccaagcccggtgta
accggaggccgggtaacagaatacgggggtttcccgtccgcccaggcgggatcaatagat
ctcaatgccgatggcagggatgagctttatggctgggtcgccgatacgtcccaatgtggt
gaggtcaattgcgacgcagaatatcttagtccccgtcggtcctggcgttttaccaaattt
gccgatgacggcacggcggccggcataggcgttaatttcccaaagccgccaagcacggga
ccgagcgattccacctctttggaggtcgagttttcctccgggcggtttgccgccgaaaga
ccaagggacctcggattcaagttcaagtggcgtgtgacatcattcacccccgaggaaggc
actacgcacaccgactataaggaaaaccgcgccggtcgagcggacgccaatctcaatata
agtctcggagcgtgttcgagcacctatgccgctgtgtgtgctctcctgaccgagggcgga
tcggttctggaccatgacggcgatggtttggatacgcgtatcaatttctcgaaaccgctg
gtcggaaagaccgatttcgccggcaatggacgccagggcgttttagcagcggcgaacgat
gcggaaaattttcgttttgtgaatggcgcttgggctgcctcggccagcggcgtacagtgc
aagaatgaggggcgtacgggtaatcgttgtgtcctcggcgacctcaatggagacggcgct
accgacatcctgcagtttctcggagagccgggaggggactacaagcttgtcgtttatctt
tcgaccggcaagtcattcgtccgcgttgccaatggcgagatcttcggatctcccttgctg
ctggacgtcgacaacgatggccgcgtggaagtccttgggccgaagaaccgcagccagaac
ctggcacgcccgacccgcatgccctggcgtctcgcgttcacggcgagcggggcgcaatgg
ctggttgatgtcaaggacttcgaccagaacatcgctttcggcgacttcaacggcgacggt
ctgccggatctggtgagcggagacgggaagacctatgtctccaaccccggcgccggcaat
ccgaatcttctccgcacggtgaagttcgagacgggcggttcggttgcggttgactacacg
ccgtcgacgcgctggacgaacgtttacatgccgcaggttctgcatgcggtgacgaagctg
acggtgagcgacgggcgcacgacggctgcggtgacggactatgcttatgcgggcgggctt
tacgatccgaaggcgcgcaagttcctgggctacaagacgatcacggtgacgaagccgctg
gcctggggcgagacgacgcgtcccgtggtagagatcacctaccgtcaggacctggccagc
tacgggctgccggcgcagacggtgagccgcgacgcggcgaacaccgcctcgaagaaggtg
gtggagacctatgcggtcaatgcggcgaccaaaccgtatcgggcattgaacacccggacg
gatacgaccctgacggaaggcagcacttcgctggtgctgcgcaaggatcggatcttcgac
gcctatggcaacataacccagctgcgggatgtcggccgtacggacttgaccggtgacgag
acctggacagtgacgtcctacgcgccaaacacgacggcctatatcgtgtcgctgccgcgg
caacgcaacgtccgctcgggcgggttcagcacctcgacggatgtgtatgagcggcaccag
gctttttactacgatggttccacggataatgcagcaccgccggccaagggcaacctgacg
atcctgcggtcttacaaatctgtcgagccgacttctgcctcctatctcgaatattttacc
ttcgacgcgtacggcaaccggctgtcgcatgtggacggggtggggaaccggacggaatgg
gactacgacgcgacctatcacctgcatgtggtgaaggagcgggcgcccaagtattttgtg
ctcggcggcctgccggcggacacgcggttcgtgacgagctacacgccggactatgtgtgc
ggcaagccggcctcgaaggtggactggaacggggtgaaggagaccttcacctacgatgcc
tattgccggccgtacggctacacgaacgccggcaccggcaaatacgtcaacacccgctat
atcgacgagggtattcccgcgacccagtcggtggtggtctacgaaccgctggcgaccgga
tcgggcaatgtctacacgcgcacctattatgacggactggcgcggcagtggcgggtgcag
acgccgccggatgtggccggtggagcgacgcgtgtcaccgacacgcgctatgacgcccgc
ggcaatgtggggcagacggccgcgacccgcttctccaacgaggcgtccaggttgacggtc
aattattacgactggaatgaccgggtggtgaaggtggtcaatccggacgcctcgcagcgg
acctacgcctacaacgtccagccggcgacggcggtcggcggcacgacgaacctgccggtg
atggaaatgcgcatgtcggacgaggagggcaaggtccgccgcacctataccgacaaggac
aacaacgtcattctcacttccggaaacctttccggtacctgggtcaacgaaagccgcacc
tacgatgtgatggggcggctgagaggggtgcgcgatcatagcggtgcgacctggacctat
acctatgaccttgtgggcaaccggctgacggcgagcgatccggatctcggcaactggtcc
tacacctatgacaacgccaatcggctggtgagccagacggatgcgcgtggcgcggtgacg
acgcttgcctacgaccagatgggccggttgcggacgaagtcggtcaagggtgcgggcgag
acggcggcgacggtgacggccaccaacacctacgacacggccgaagccggtgtgggcgcc
gcgccgttccacgatgtcgggctcttgacggtgtcctccaacggctttgccaagcacagc
tacagccgcagcctgacgggctcgggcacgaagctgacgacgaagacggtgatcgacggg
atcacccacacgacggtggagacgaggggcagggcgggcctgacgcttgcgatcgcctat
agtccggcggccgtcaacgtcggcacggcgtcggccccgtggacctacaacatctccaac
cggcttctgacggtgcccggccatatcaccgcggcaacctatgaggcggacggccagacg
acctcgatcagctatgccaacggagtgtcgacgacgttcgcctatgcgccggagcggcgc
tggctgacgcgggtgacgaccaagaagggcaccacggtgctgatggacaatcagtacacg
gtgcgcgacaagctcggtcggatcaaggcgatcaccgggctgaccactgccgacagctgg
acctacacctatgacgatctcggccgcctgaccaaggccgacaatctcggcaacaacacg
ctcgacgagacctacagctattcggtgaccggcaatctgacgtcgcgcacgaagatgggg
acctatacctatccggccggaactgcggcgagaccgcatgcggcgaccaagatcggcacg
aagacgctttcctacgacgccaacggcaacatgctgtcggacggcacccgcacgctggtg
tgggatcggtcgaacctgcttggaagcgtcacgcagtcgggatcggcggtgaccttcgcc
tatggaccggacggagcgcgggcgatgaagacctgggccttcggcaagacgctctatgcc
agtgccgatgtcgagatcgaccgcaccacgcccggcgcggagatctatacccgctatccg
catcccgacctcaaggtcaccaccacggcggcgggggctaccaccaagagctacctgcac
cgcgatcatctcgcctcggtccggctggtgaccaacgacaccggcacgccggccgagcag
accgcctatgccgcctatggccagccgaccaacacggcgatgcagaccaggaagggctat
atcggcgaacgcttcgatgccgaaaccggcctcatgtacctcaacgcacgatactacgat
ccagcattcggcaggtttatctctcctgacgactgggaccccacaatcgacggcgtcggc
accaaccggtacgcctatgcccagaacgatcccgtcaataactcagatccgaacgggcac
tccatcagtccggacatcagcaagttggatagcgaaggcacaggcggcgatagcggctcc
gacaacgagcagactgaacctcaaacccaggcctcaaaggacattaccgaggcagcgaaa
gatttgcagcccaatcagcgcgataagaaagaagaggatgcggatcaggcactcatggga
tatgcccgagttgatgaacatggctccggaatggtaggtttgtctggtgccgatgctatc
gacgcaagcacgcgctcctcgggaggtgtgcatcaacagattgggcattccccgacagta
attgatccgatcttgcttgacggccgcggagggagatcaggaatcgagggacacggcctt
atcaacacaaatagtggaagcggctcaaattcgtctgtagctgatagaattgcacgtgat
ggaaatatcagcattgaattagctcaacaagttacaggaataagccggcatggaatcaat
caagttatcaatcgaggagtgggaccttcagctatattggacgcgcttcgaaacccgtta
aagatcgttccaaggtcaaacggaacgactcaataccgcggagccgacgctactgtcgtg
atcaatccagaaggaaatattgtgactgtgtggcctcaatga
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