Novosphingobium pentaromativorans: JI59_00545
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Entry
JI59_00545 CDS
T03399
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JI59_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_00545
Enzymes [BR:
npn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JI59_00545
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JI59_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CCDC93_CC
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
AIT78418
UniProt:
G6E6T5
LinkDB
All DBs
Position
120341..120595
Genome browser
AA seq
84 aa
AA seq
DB search
MNGETPNIDALSFEDALRALEDVVRKLESGDVPLEDSITLYERGEELRKHCQKRLDAAQA
RIEKIVAGPDGVPSGTQPFDAADR
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagagaccccgaacatcgacgccttgagctttgaggatgcgctgcgcgcgctg
gaagacgtagtgcgcaagctcgaaagcggcgatgtgccgctcgaagattcgatcacgctt
tacgaacgtggtgaagagctgcgcaagcattgccagaagcgcctcgatgcggcccaggca
cggatcgagaagatcgtcgccggacctgacggggtgccgtccggcacccagcctttcgat
gccgcggatcgctga
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