Novosphingobium pentaromativorans: JI59_01305
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Entry
JI59_01305 CDS
T03399
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_01305
Enzymes [BR:
npn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JI59_01305
DNA repair and recombination proteins [BR:
npn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JI59_01305
Prokaryotic type
JI59_01305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
AIT78543
UniProt:
G6EHP7
LinkDB
All DBs
Position
294217..295626
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AA seq
469 aa
AA seq
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MSAQSSAQSSANSHSPVIVWFRRDLRLSDQAALAAAAAQGPVLPVYVLDDETPRHRAMGG
ASRWWLHYSLASLDATLREKGSRLILRKGKCEDVLAALAQETGASEVHALHHYEPWWRNA
EKSVGKRLTLHLHHGNYLAPPGTVTTGSGSPYKIYTPFWRALIERMPPPEPQRRPQNIAS
PDSWPASDALDDWGLLPTQPDWAGGMRDMWEPGEEGAKKRLRAFADHASHYEGQRNLPAV
EGTSFLSPHLHFGEVSPAQVWHATSSAGGSVATFLGEIGWRDYAQNVIVQFPDYGSRSAR
DTFDHFPWRSGKEAQEDLRAWQMGMTGYPIVDAGMRQLWHTGWMHNRVRMIAASFLIKHL
LIDWQEGEQWFWDTLVDADYASNAVNWQWTAGSGVDSNMFVRIMAPLTQSEKFDAAAYIR
EWVPELADLPDAEIHDPGPMYRPGDYPARIIEHRAGRERALAAWEKAKE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccaatcgtcagcccaatcgtctgccaattcgcactctcccgtcatcgtctgg
tttcgccgtgacttgcggctttcggaccaggcggcgctggccgcggccgccgcgcaaggt
ccggtcctgccggtctatgtcctcgacgacgagacgcccaggcaccgggcgatgggcggc
gcctcgcgctggtggctgcactacagcctcgcaagcctcgatgctaccttgcgggagaaa
ggctcccggctgatcctgcgcaagggcaagtgcgaggacgtcctggccgcgctggcgcag
gaaaccggcgcaagcgaagtccacgcgcttcaccattacgaaccctggtggcgcaatgcc
gaaaaaagtgtcggcaagcggctgaccctgcacttgcaccatggcaattatcttgccccg
cccggaacggtcacgaccggctcgggcagtccctacaagatctacacgccgttctggcgc
gcgctgatcgagcgcatgcccccgccggagccgcagcgccgcccgcagaacatcgcctcg
ccggacagctggcccgcatccgacgcgctcgatgactggggactgctgccgacacagccc
gattgggcagggggcatgcgcgatatgtgggagcctggcgaggaaggcgcgaagaagcgc
ctgcgcgcctttgccgatcacgcctctcactatgaggggcagcgtaacctgcccgcggtg
gagggcacttccttcctttcgccgcacctgcacttcggcgaagtctctccggcgcaggtc
tggcatgcaacctcctcggcgggcggctcggtcgcgacgtttctgggcgagatcggctgg
cgtgactatgcgcagaacgtgatcgtgcagtttcccgactatggcagccggtcggcacgg
gataccttcgatcacttcccctggcgttcgggaaaggaggcgcaggaagacttgcgcgcc
tggcagatgggcatgaccggctatcctatcgtcgatgccgggatgcgccagctctggcat
accggctggatgcacaaccgggtgcggatgatcgcggccagcttcctcatcaagcacctg
ctgatcgactggcaggaaggggagcagtggttctgggatacgctggtcgatgccgactat
gcctcgaacgcggtcaactggcagtggaccgctggatcgggcgtcgattccaacatgttc
gtgcggatcatggcgccgctgacgcagtctgagaaattcgacgcggcagcctacatccgt
gaatgggtgcccgagctggcggacctgccggatgcggagatccacgatccggggccgatg
tatcggcccggggactatcccgcccgaattatcgaacatcgcgccggcagggagcgggcg
cttgccgcatgggagaaggcaaaagagtga
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