Novosphingobium pentaromativorans: JI59_01510
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Entry
JI59_01510 CDS
T03399
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
npn01011
]
JI59_01510
Enzymes [BR:
npn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JI59_01510
Peptidoglycan biosynthesis and degradation proteins [BR:
npn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JI59_01510
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_12
SLT_2
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AIT78583
UniProt:
G6EHU0
LinkDB
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Position
complement(337821..339635)
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AA seq
604 aa
AA seq
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MIERSGKRILTKLAKAGWIAGLAIACTATVATAPAYANSAAVDYFRTRADRTAVPSLLSQ
DDRAYYKQVFDAIDAKNWSKVQQMLAERPDGPLHQQARAEYYLAAGSPKIELPDLKDWLA
KGTELPGADQISRLALKRGAEAIPDLPTEQQFARLPSMPKRTRPSSINDGTMPEAISSGI
LERIKNDDPTGARVLLDGIDAGLSNSARAEWRQRVAWSFYIENQDASAYQMAQLAALGTG
PWVGEAWWTAGLAAWRLGDCDAASDAFAKAAKTSENAELTSASYYWQSRALVRCRRPDLA
AEPLRMAAKRDETLYGMLASEQLGVHLPEQHAGADFTQSDWQSLRNNTNVRTAVELAEIG
EDGLADEVLRHQARIGDPGQYEPLSRLARDLGLPSTQLWMAYNAPRGGKPEPATRFPTPK
WTPIGGWKVDPALVYAHALQESIFQASVVSPAGARGLMQIMPSAARDHASDIGVSGSASD
LNKPEINLAFGQRHLEMLKGSSGTQGLLPKVMAAYNAGLAPVTRWNTEVKDDGDPLLWME
SIPYWETRGYVNIVLRNYWMYERQAGGVSESRMALAQDMWPTFPELAGSKGVRMAANGAI
LRGH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaacgatcggggaagcgaattttgactaaacttgccaaggcaggatggatcgcc
ggactcgccatcgcgtgcaccgcgaccgtggcgaccgctcctgcatatgcgaacagtgcc
gccgtcgactatttccgcacccgcgcggaccgcactgccgtgccttcgctgctgagccag
gatgatcgcgcctattacaagcaggtgttcgacgcgatcgacgccaagaactggtccaag
gtccagcagatgctggccgagcgtcccgacggccccctgcaccagcaggcccgcgcggaa
tactatcttgccgccggttcgcccaagatcgagctgcccgacctgaaggactggctggcc
aagggcacggagcttcccggcgccgaccagatttcccgccttgccctgaagcgcggggcc
gaggcgatccccgacctgccgaccgagcagcagttcgcccgcctgccctcgatgcccaag
cgcacccgtccctcctcgatcaacgacggcacgatgcccgaggcgatttcctccggcatc
ctcgagcgcatcaagaacgacgacccgacgggcgcgcgcgtcctgctcgacgggatcgac
gccgggctgagcaattcggcgcgcgccgagtggcgccagcgcgtcgcctggagcttctac
atcgagaaccaggacgcctcggcctaccagatggcgcagctggctgcccttggcaccggc
ccctgggttggtgaggcatggtggacagcaggccttgccgcatggcgcctgggcgattgc
gatgccgccagcgatgcctttgccaaggccgcgaaaacgtccgagaacgcagaactcact
tcggcatcctattactggcagagccgcgccctcgtgcgctgccgccgccccgacctcgcc
gcagagccgctgcgcatggcggccaagcgcgacgagacgctttacggcatgctggcgagc
gaacagctcggcgtgcacttgcccgaacagcatgcaggtgcggacttcacccagtcggac
tggcagtcgctgcgcaacaacaccaatgtacgcaccgcggttgagctggcggaaatcggc
gaggacggccttgccgacgaagtgctgcgccatcaggcccgcattggcgatcccggccaa
tacgaaccgctctcccgcctagcccgcgaccttggcctgccttcgacgcaattgtggatg
gcctacaatgccccgcgcggcggcaagcccgaaccggcaacccgtttccccactcccaag
tggacgcccatcggcggctggaaagtcgatccggcgctggtctatgcccatgcgctgcag
gaatccattttccaggccagcgtcgtcagccccgccggtgcgcgcggcctgatgcagatc
atgccttccgccgcacgcgatcatgcctcggacatcggcgtgtcgggatccgccagcgac
ctcaacaagcccgagatcaatctcgcgttcggccagcggcacctcgaaatgctcaagggc
tcatcgggaacgcagggcctgctgcccaaggtcatggcggcctataatgccggtctagcg
ccggtcacgcgctggaataccgaggtcaaggacgacggcgatccgctgctctggatggaa
tcgattccttactgggaaacccgcggctacgtgaacattgtcctgcgcaattactggatg
tacgaacgccaggcgggcggcgtttcggaaagccggatggcgcttgcacaggacatgtgg
ccgactttcccggaactggccgggtcaaagggcgtacgcatggcagcgaacggagcgatc
ttgcgtggccattga
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