Novosphingobium pentaromativorans: JI59_02440
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Entry
JI59_02440 CDS
T03399
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npn03019
]
JI59_02440
Messenger RNA biogenesis [BR:
npn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JI59_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
ZSWIM1-3_C
AAA_30
Rad17
AAA_18
TsaE
cobW
AAA_22
CoaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIT78748
UniProt:
G6EIC0
LinkDB
All DBs
Position
complement(526956..527894)
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AA seq
312 aa
AA seq
DB search
MTVESGTEAPEVAKQRVLLVTGMLGAGKTTALRVLEDLGWEIIDNFPIRLLKGLIETSPG
DGPGAPLAIGFDSRTRGFDPQRIIRQVQALGKSGTIELTTLFLDCSGRELERRYNETRRR
HPLASDAPVSTGIRAERELLTPLRRWADILLDTTDFTSNDLQRTIREQFASSAPNELTVT
VSSFGFSRGMPPVADLVFDMRFLNNPHWDADLRPMTGQDLPVGEYIRKDPAFEEAFTRIR
DLVLLLLPRYAAQGKAYAHIAFGCTGGRHRSVFVAEQLVAALRQNGFSPTLLHRNLGSRA
ADLLEGGLRREG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgagtccggtacagaagctcccgaagtcgcaaaacagcgcgttctccttgtc
accggcatgctgggtgccggcaagacgacggcgctgcgcgtactggaagacctgggctgg
gagatcatcgacaattttccgatccgcctgctcaagggcctgatcgagacttcccccggc
gatggaccgggcgcgccgctcgccatcggtttcgacagccgcacccgcggcttcgatccg
cagcggatcattcgccaggtccaggcgctgggcaagagcggcactatcgagctgaccacg
ctgttcctcgattgctcgggccgggaactggaacgacgctacaacgaaacgcggcggcgc
catccgctggcttcggacgccccggtttcaaccggcatccgcgccgagcgcgaactgctc
accccgctgcgccgctgggccgatatcctgctcgacacgaccgattttacctcgaacgac
ctgcagcgcacgattcgcgaacagttcgcctcgagcgcgccgaacgaactgacggtgact
gtctccagcttcggattttcacgcggaatgccgcccgtcgccgacctcgtcttcgacatg
cgcttcctcaacaatccgcactgggatgccgacttgcgcccgatgaccggtcaggatctg
ccggtcggcgaatacatccgcaaggaccccgccttcgaggaagcatttacccggatccgc
gatctggtgctcttgctgctgccccgctacgcggcgcaggggaaggcgtacgcccacata
gcctttgggtgtaccggagggagacaccgttcggtgttcgttgccgaacagttggttgcg
gccttgcgtcagaatggattttcgcccacattgctgcaccgcaacttgggctcgcgagca
gccgatcttctggaaggaggtctgcggcgtgaaggataa
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