Novosphingobium pentaromativorans: JI59_03210
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Entry
JI59_03210 CDS
T03399
Name
(GenBank) structural toxin protein RtxA
Organism
npn
Novosphingobium pentaromativorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
DUF5801
Cadherin_4
HYR
Motif
Other DBs
NCBI-ProteinID:
AIT81773
UniProt:
G6EIS7
LinkDB
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Position
690249..693890
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AA seq
1213 aa
AA seq
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MPPAGATDSFVYTITDGDGDTSTTTLTISLTDSGLAASNEDASVDEAALGIGSNPSSTAE
TVSGSLTDNASGGAGGYTYALVGSATGSHGTITIDPSGSWSYTLTSPVDGATLDNGVTTE
NNLESFTYQVTDANGNTTTSTITIDVIDDVPTARADTDSVVEGASTDGNVLSGTGTTSGL
VDVLGADGAAPGGAVTGVATGTDTSAPVTGNLGGAGIAGTYGTLILNADGSYTYNSTANS
ISGNATDSFVYTITDGDGDTSTTTLTISLTDVSLVGDDESVTVYEKALDTAQTGADVAAG
SITGSMPSDPGETASGAVSVTGATGYSIAGGSVSGNETTVVGTYGTLVLNNSTGAFTYTL
TSPVTTTPSANDGVTTALGAESFTYTASDANGNTTTGTISIDVVDDTPYAVVPEAIQVTN
GAAPVSAPADLDADMSVIDNYGADGAGTVRFAPSLDGADSGLTHNFVSITYTLVSDTVLE
AYAGADKIFTVTLDPTTATYTVDMDGTIDSIQTIDFNAGGYNFVGGNNSWSGFIPVGETV
GSPIDNNSQDLLLTPSINNADDGTINSTANTGGIGGGASVGSNETFRVDFVTDLRGDPKD
GAGDYDTDTNRDHMFDGHYTVNGAVALFKSTNGSTVNIAAFDDPDGNTAVGDGDKDSITG
ISIVWRGTQYVDGSGDPIIIPTITATNYTVNGHVFTVTLLGDGSVNVAGVEGDPGSSQVG
TQIAVFTGDGFNSVEYTWAGGDTFQIGDFGASTLTNDPVNFTIPVEVVDGDGDVSAQSNL
SITAVTTTPPVALDLDGDGVEFVGLDAGVTHDYGSGLVQTAWLSADDGLLAHDTGHGLDI
VFTDDAAGAETDLEGLRLAYDSNGDGKLTAADESYSEFGVWQDANSNGVVDAGEFKTLAQ
MGITSIELTAEGPGSSQADGDAIVHATGEYTMKGATYALADVSFATASVESQTAARTAEM
AAITAAAAGFMMSGAAHAMPLSPIAIEAIAAAMQTFETHLPEVTVAVPEHAPATPPVTFL
QDGQQAHQDSEPESHPSQHAAEQGAGHGLGDVVQHQDVSVQPLGSGEEGHVQASAAPALF
GGADSGLMQALLLAAQGEQAGGSKDQGNGTGAGQGSGHGGEHGSGNLPAVQEAIAESAGH
HAVDSLIDHFAGHQGAHGAPAIAETMGADGLDHVLGAMLAGGGLDGLHAAGLAGGFEMAA
MAAAMEAHSTTVA
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcctgcgggggcgaccgacagcttcgtctacaccatcaccgatggcgacggcgat
acctcgaccacgacgctgacgatcagccttaccgacagcggccttgccgcgagcaacgag
gatgcgagcgtcgatgaggccgcgctgggcatcggttccaacccgtcctcgacggcggag
accgtctcgggctcgctgaccgacaatgcctcgggcggcgcgggcggttatacttatgcg
ctggtcggctcggcgacgggcagccacggcacgatcaccatcgatcccagcggttcttgg
agctacacgctcaccagcccggtcgacggcgcgacgctcgacaacggcgtgaccaccgag
aacaacctcgagagcttcacctaccaggtgaccgacgccaacgggaacacgaccaccagc
acgatcaccatcgacgtcatcgacgatgtgcccaccgcgcgcgccgataccgacagcgtc
gtcgaaggcgcttcgaccgatggcaatgtgctttccggcaccggcacgacctcgggtctg
gtcgatgtgctgggcgccgacggcgcggccccgggcggcgcggtcaccggcgttgccacc
ggcaccgatacctcggcgccggttaccggtaacctcggcggggctggcatcgcgggcacc
tacggtacgctgatcctcaatgcggatggcagctacacgtacaacagcacggcaaattcg
atctcgggcaacgcgaccgacagcttcgtctacaccatcaccgatggcgacggcgatacc
tcgaccacgacgctgacgatcagccttaccgatgtttcgctggtcggcgatgacgagagc
gtcacggtttacgaaaaggccctcgatacggcccagactggcgcggatgttgcggccggt
tcgattaccggttcgatgccatcggatccaggcgaaaccgcgagtggcgccgtctccgtg
acgggggctaccggctattctatcgccggaggatccgtcagtgggaacgagacgacggtc
gtggggacttacggcacgctcgtgctcaacaacagcaccggcgcctttacctacacactg
acttcgcccgtcacgacaacgccgtcggcgaatgatggcgtgacgacggcgctcggcgcg
gaaagcttcacctacaccgcgagcgacgccaacgggaacacgacgacaggcacgatctcg
atcgatgttgtcgacgacacgccctatgccgtcgtgcccgaggcgatccaggtgaccaat
ggcgcggcgccggtctcggcccccgcggacctcgacgccgacatgtcggtgatcgacaac
tacggggccgacggggcgggcactgtgcgcttcgcaccctcactggacggggcggacagc
ggcctgacgcacaacttcgtatcgatcacctacacgctggtgagcgatacggtgctggaa
gcctatgccggcgcggacaagatcttcaccgtcacgctggaccctacgacggccacctac
acggtcgacatggacgggacgatcgactcgatccagaccatcgatttcaatgccggcggt
tacaatttcgtgggcggcaacaacagctggtcgggcttcattccggtgggcgagacggtg
ggatcgccgatcgacaacaacagccaggacctgctgctgacaccgtcgatcaacaacgcc
gacgacggcacgatcaactccaccgccaataccggtggtatcggcgggggcgcctcggtc
ggttcgaacgagaccttccgggtcgacttcgtcaccgatctgcgcggcgatccgaaggac
ggcgccggggactacgatacggatacgaaccgcgaccacatgttcgacggccactatacc
gtgaacggggcggtggcgctgttcaagtcgaccaatggctcgaccgtgaacattgccgcg
ttcgacgatccggacggcaacaccgccgtcggtgacggcgacaaggactcgatcaccggc
atttcgatcgtctggcggggaacgcagtacgtcgatggaagtggtgatccgatcatcatc
ccgacgatcactgcaacgaactacaccgtgaatggacacgtctttaccgtgaccctgctt
ggcgatggttcggtcaatgtcgccggggttgaaggcgacccgggatcgagccaggtcggc
acgcagatcgcggtcttcacgggcgacggcttcaacagcgtcgagtacacctgggcgggt
ggcgacaccttccagatcggcgacttcggcgcgagcacgctgaccaacgacccggtcaac
ttcaccattccggtcgaagtggtggacggcgacggcgacgtttcggctcagtccaatctc
tcgatcacggcagtgacgacgacgcctccggtggcgctcgatctcgatggcgacggcgtc
gaattcgtcgggctcgatgccggagtcacgcacgactatggcagcggacttgtgcagacc
gcttggctcagcgccgatgacggcctgctggcccacgataccgggcacggcctcgatatc
gtcttcaccgacgatgccgcgggagcggaaaccgacctcgagggcctgcgcctggcttac
gacagtaatggcgacggcaagctgacggcagccgatgagagctacagcgagttcggcgtc
tggcaggatgcgaacagcaacggcgttgtcgatgcgggcgagttcaagacgctggcgcag
atggggatcacttcgatcgagctgactgcggaaggcccggggtcgtcgcaagccgatggc
gatgcaatcgtccatgcgaccggcgagtacaccatgaagggtgccacttacgcactggcc
gacgtctcgttcgcaacggcgagcgtcgagagccagactgcggcacgcactgccgaaatg
gcggcgatcactgcggctgcggcaggcttcatgatgtcgggtgcggcccatgcgatgccg
ctctcgccaatcgcgatagaggcgattgccgcggcgatgcagactttcgagacgcatctg
cccgaagtgacggttgcagtgccggaacatgctccggcgacaccgccggtgacattcctg
caggatggccagcaggctcaccaggacagcgagcccgaaagccacccgtcgcagcacgcg
gcggagcagggcgccgggcatggcctgggtgacgtggtgcagcatcaggacgtctccgtg
cagccgcttggcagcggcgaggaaggccacgttcaggcgagtgcggctccggctctgttc
ggcggcgctgactcggggctgatgcaggcattgctgctcgccgcacagggcgagcaggcc
ggtggttcgaaggaccagggtaatggcaccggagccgggcaggggagcgggcacgggggc
gaacatggctccgggaatctacctgccgtgcaggaagcgattgctgaaagcgccgggcac
catgctgtggactcgctgatcgaccacttcgccgggcatcaaggcgcacacggcgctccc
gcgattgccgagacgatgggggcggacggcctggatcacgtgcttggcgccatgctcgcc
ggcggcggcctcgacggcctgcacgcggcgggtctggccggtggatttgagatggctgca
atggctgcagccatggaagcacattcgacgacggtcgcctga
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