KEGG   Novosphingobium pentaromativorans: JI59_05115
Entry
JI59_05115        CDS       T03399                                 
Name
(GenBank) (4Fe-4S)-binding protein
  KO
K12063  conjugal transfer ATP-binding protein TraC
Organism
npn  Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:npn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:npn02044]
    JI59_05115
Secretion system [BR:npn02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   JI59_05115
SSDB
Motif
Pfam: DUF5934 TraC_F_IV P-loop_TraG AAA_10 TrwB_AAD_bind T4SS-DNA_transf CbiA AAA_16 TraG-D_C FtsK_SpoIIIE nSTAND3 ABC_tran AAA_23 DUF87 AAA_22 AAA_33 Mg_chelatase MeaB AAA_29 NACHT Fer4_NifH PIF1 MobB AAA_5 YobI-ATPase ATPase_2 RNA_helicase
Other DBs
NCBI-ProteinID: AIT79213
LinkDB
Position
1067590..1070136
AA seq 848 aa
MAEKLKTIVDRLLTGLLGDAEHAEHDRPALMLDLLSDWLPYRVYDPTSRLYFNARSKGFV
LSVTPLIGADERTGEILGSFFSEGLPAGACLQVLHLASPRISRIVAPWFAPRYVQGGVYE
AIARHRARRLYGLVWESGSQDAPFHARHHQVIVSVGVPAAKAVSNEDLKQTRDGLIAMLK
SLNLGVAEVQPQQLIAIIDDLTSPTTAPQDDAVPYNPNDAIAAQAIRHDIELVIHEDRMR
LVTERFRATGKIEDGVPEIGTVYPDAFDVRHFSSRNMPQRWAPWECARLIGDMFTDKLRF
PCPAATMLCLVYPDQEAASAKAGFKFMRTTSLAGTRSARFLPRIGEQAAEWQHVQSELQE
GRRLVRVFYGLTTYSPLGRGDRDERAIKSIYKAAGWDLADERYLQIQGLLAAMPMTLADG
LGADMERLKRFKTVLSTTAANIAPMQGEYLGSVHPHLLFVGRRGQPFFWSPFENDAGNHN
VAICGKSGSGKSVLLQEMCAALRGAGAQVVVIDDGRSFEHSVKLQGGRFVEFTMKAGFCL
NPFSMIDGERAAEDEDYRLDCFGMVKAIVGQMARHSAKLNDTERGLIDRAVNMVWSERGV
DASITGVGEALAGLGNEAASDLATALAPYMTGGTYGAFFEGQASLDLDTDFTVFEMSDLA
TREELRSVVLSAIMFMTSQAMTRSPRSVRKLLLIDEAWSMLKGGSMGEFVETYARTCRKY
GGALATATQSLNDYYKSDGATAALENSDWMLILQQKPETIADFKASKRLDMDDRTETLIR
SLKRSGSDYSEVFIKGPETEAIGRLVLDDYSATLFSSSPQTFAAIDAEVARGHQLADAIE
RIAFANRT
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggccgagaaactcaagactatagttgacaggctccttaccgggcttctgggcgatgcc
gagcacgctgaacatgaccggcctgccttgatgctcgatctgctgtcggactggctccct
taccgggtctatgatccgacgagccggctctatttcaacgcgcgctcgaaaggcttcgtg
ctttcggttacccctctgatcggggcggacgaacgcaccggcgagatcctcgggtccttc
ttctccgaggggcttccggcaggcgcttgcctccaggtcctgcatctcgcctctccgcgc
atcagccggatcgtcgcaccctggtttgcgccgcgctatgtccagggcggcgtctacgag
gcgattgcccgacaccgtgcgcgtcggctctacggccttgtctgggaatcgggctcgcag
gatgcgcccttccacgcccggcaccatcaggtcatcgtttcagtcggcgtgcctgccgcc
aaggcggtcagcaatgaggatctcaagcagacccgcgacggccttattgccatgctgaaa
tcgctcaatctgggcgtggccgaagtccagccccagcaactgatcgcgatcatcgacgac
ctgacttcgccgaccaccgcgccgcaggacgatgccgtgccctataatccgaacgacgcg
atcgcggcccaggcgatccggcacgatatagagctcgtcatccacgaagaccggatgcgg
ctcgtcaccgagcggtttcgtgcgacgggcaagatcgaagacggcgttcccgagatcggc
acagtctaccccgatgccttcgacgtgcggcatttttcctcgcgcaacatgccccagcgc
tgggcgccgtgggaatgcgcgcggctcattggcgacatgttcaccgacaagctgcgcttc
ccctgtccggcggcgacgatgctgtgcctggtctatcccgaccaggaagccgcttcggcc
aaggccggcttcaaattcatgcgcacgacgagccttgccggaacgcgcagcgcgcgtttc
ctgccccgcatcggcgagcaggcggccgagtggcagcatgtgcagtccgagctgcaggaa
ggccgccgtttggtgcgggtcttctatggcctgacgacctactccccgctcggccgcggg
gaccgcgacgaacgcgcgatcaagtcgatctacaaggcggcgggctgggatcttgccgat
gagcgctatctgcagatccaggggctgctggcggccatgccgatgacgctggccgatggg
cttggcgcggacatggagcgcctcaagcgcttcaagaccgtgctctcgacgacagcggcc
aatattgctcccatgcagggcgagtatctcggcagcgtccatccgcacctgctgttcgtg
ggccggcgcggccagcccttcttctggtcgccgttcgagaacgatgcgggcaaccacaat
gtcgcgatctgcggcaagtcgggatcggggaagtcagtgctgctccaggaaatgtgcgcg
gcgctgcgcggcgctggcgcgcaggtcgtggtcatcgacgacgggcgcagcttcgagcat
tcggtgaagctgcaaggcggccggttcgtcgagttcacgatgaaggcgggcttctgcctc
aatccgttctcgatgatcgacggcgagcgcgcggccgaagacgaggattaccggctcgac
tgcttcggcatggtcaaggccattgtcggccagatggcgcggcacagcgcaaagctcaat
gacaccgagcgcggcctgatcgatcgggcggtcaacatggtctggagcgaacggggcgtc
gatgcctctatcaccggcgtcggcgaagcactggccggtctcggcaatgaagccgcgagc
gatctcgccaccgcgcttgctccatacatgaccggcggcacctatggcgcgttcttcgaa
ggccaggcgagcctcgatctcgacaccgatttcaccgtcttcgagatgtcggaccttgcc
acccgcgaggaactgcgcagcgtcgttctctcagcgatcatgttcatgaccagccaggcc
atgacccgcagcccgcgctcggtgaggaagctgctcttgatcgatgaggcgtggtcgatg
ctcaagggcggctcgatgggcgagttcgtcgaaacctatgcccgcacctgccgcaaatat
ggcggggcgctggcaaccgcgacgcagtcactcaacgactattacaagtctgatggggcg
accgctgcgctggaaaacagcgactggatgctgatcctccagcagaagcccgagacgatc
gccgatttcaaggcgtcgaagcgcctcgacatggacgaccgcaccgagaccctgatccgc
agcctgaagcgttcgggcagcgattattcggaagtcttcatcaagggcccggagaccgaa
gccatcggtcggctcgtcctcgacgactattcggcgacgctgttttcaagctcgccccag
acctttgccgcgatcgatgccgaagttgcgcgcggccatcagcttgccgacgcgatcgaa
cggatcgcctttgccaatcgcacctga

DBGET integrated database retrieval system