Novosphingobium pentaromativorans: JI59_05675
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Entry
JI59_05675 CDS
T03399
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_05675
03036 Chromosome and associated proteins [BR:
npn03036
]
JI59_05675
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_05675
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JI59_05675
Chromosome and associated proteins [BR:
npn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JI59_05675
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JI59_05675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
GTP_EFTU_D2
Motif
Other DBs
NCBI-ProteinID:
AIT79314
UniProt:
G6EEW2
LinkDB
All DBs
Position
complement(1177241..1177513)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADTSGLTRSDATKAVEGVFDAITGALKKGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMEIKASAQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgatctcatcagcgcagttgccgacaccagcggtctgacccgcagcgat
gcgaccaaggccgttgaaggcgtcttcgacgccatcaccggcgcgctgaagaagggtgac
gaggtccgcctggttggtttcggcaccttctcggttgccaagcgcaaggcctcgaccggc
cgcaacccgcgcaccggcgagcccatggaaatcaaggcttcggctcagccgaagttcaag
gctggcaagggcctcaaggacgccgtcaactaa
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integrated database retrieval system
