Novosphingobium pentaromativorans: JI59_06305
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Entry
JI59_06305 CDS
T03399
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npn03021
]
JI59_06305
03009 Ribosome biogenesis [BR:
npn03009
]
JI59_06305
Transcription machinery [BR:
npn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JI59_06305
Ribosome biogenesis [BR:
npn03009
]
Prokaryotic type
rRNA transcription factors
JI59_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
KH_1
HHH_5
KH_NusA_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AIT79418
UniProt:
G6EEJ4
LinkDB
All DBs
Position
complement(1301150..1302784)
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AA seq
544 aa
AA seq
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MASAISANRAELLAIANSVASEKMIDKSIVIEAMEEAIQKSARNRYGAENDIRAKLDPRT
GDLRLWRVVEVVEHVEDYFKQVDLKQAEKLQKDAKIGDFIVDPLPPVDLGRIDAQSAKQV
IFQKVRDAERDRQYEEFKDRAGEVITGVIKSVEFGHVIVNLGRAEGVIRRDQQIPREAAR
VGERVRALVLRVERQNRGPQIFLSRAHPEFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISHDHSIDPVGACVGMKGSRVQAVVQELQGEKIDIIPWSEDTATFVVNALQPATVS
RVVIDEEESRIEVVVPDDQLSLAIGRRGQNVRLASQLTGSQIDIMTEAEASEKRQKEFTE
RSKMFEEELDVDETLSQLLVAEGFTELEEVAYIDMAELAAIEGFDEELAEELQSRAHEAL
ERREEAAREERRALGVEDAVAELPHLTEAMLVTLGKGGIKTLDDVADLATDELIAKKRSE
QRRRDGSVNRRAREEDKGGVLGEYGLTEEQGNEIIMAARAHWFDDEPADEAPETEEAADA
ESSQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcgatttccgccaaccgcgccgagctgcttgcgatcgcgaactccgtcgca
tcggagaagatgatcgacaagtcgatcgtcatcgaggcgatggaagaagccatccagaag
tcggcccgcaaccgttacggtgcggagaacgacatccgtgcgaagctcgatccgcgtacc
ggcgacctgcgcctgtggcgcgtcgtcgaagtggtcgagcacgtcgaagactatttcaag
caggtcgatctcaagcaggccgaaaagctgcagaaggacgccaagatcggtgacttcatc
gtcgatccgctgccgccggtcgatctcggccgcatcgatgcgcagtcggccaagcaggtg
atcttccagaaggtccgcgatgccgaacgcgaccgccagtacgaggaattcaaggatcgt
gcgggtgaagtcatcaccggcgtgatcaagtcggtcgaattcggccacgtgatcgtcaac
ctcggccgcgccgaaggcgttatccgccgcgaccagcagatcccgcgcgaagcggcccgc
gtcggcgagcgcgtgcgtgcgctggtcctgcgtgtcgagcgccagaaccgcggtccgcag
atcttcctgtcccgcgcgcaccccgagttcatgaagaagctcttcgcgcaggaagtgccc
gagatctacgacggcatcatcgagatcaaggccgccgcccgcgacccgggctcgcgcgcc
aagatcggcgtgatcagccacgaccactcgatcgatcccgtcggtgcctgcgtcggcatg
aagggcagccgcgtccaggccgtcgtgcaggaactgcagggcgagaagatcgacatcatt
ccctggagcgaggacaccgcgactttcgtcgtcaacgcgctccagcccgcgaccgtcagc
cgcgtcgtcatcgacgaggaagaaagccgcatcgaagtcgtcgtgcccgatgaccagctt
tcgctggcgatcggtcgccgcggccagaacgtgcgtctcgcttcgcagcttaccggttcg
cagatcgacatcatgaccgaggccgaggcttcggagaagcgccagaaggaattcaccgag
cgctccaagatgttcgaggaagagctcgacgtcgacgagaccctctcgcagctgctggtg
gccgaaggcttcaccgaactggaggaagtcgcttacatcgacatggccgaactggccgcg
atcgagggcttcgacgaggaactcgccgaagagctccagagccgcgcccatgaagcgctc
gagcgccgcgaggaggctgcccgcgaggaacgccgcgcgctgggcgtcgaggatgccgtg
gccgagctgccgcacctcaccgaagcgatgctggtcacgctcggcaagggcgggatcaag
acgctcgacgacgttgccgaccttgctaccgacgagctcatcgccaagaagcgttccgag
cagcgtcgccgcgacggctcggtcaaccgccgcgcccgcgaagaggacaagggcggcgta
ctcggcgagtacggcctgaccgaagagcagggcaacgaaatcatcatggccgctcgcgcc
cactggttcgacgacgaaccggcggacgaagcgcctgaaaccgaggaggccgccgatgcg
gaatcctcgcaatga
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integrated database retrieval system
