Novosphingobium pentaromativorans: JI59_07255
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Entry
JI59_07255 CDS
T03399
Name
(GenBank) RNA polymerase
KO
K24073
RNA polymerase sigma factor CnrH
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npn03021
]
JI59_07255
Transcription machinery [BR:
npn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JI59_07255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
FliO
KORA
HTH_Tnp_ISL3
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AIT79593
UniProt:
G6EDZ2
LinkDB
All DBs
Position
1513969..1514529
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AA seq
186 aa
AA seq
DB search
MEGRNDTPDEELVEKIIAGDKAAFGRLVEPHLPRLLGLARRMLSSADEAEDALQNALASV
WMARAKLDPRKPVAAYLTTVTLNKCRDRLRRQKVVRLLSLRALGPDVAVAADEPGPDVEI
ADRQLLAQVTNAIDRLPLRLREALVLVAIEGRSHGEVAKLLGVTEKSVETRVYRARQRLR
NKIDFL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtggaggggcggaacgacacacctgacgaggaactggtcgaaaagataattgcaggggac
aaggcagcattcggcagactcgtcgagcctcatctgccccgcctgctcggtctggcccgc
cggatgctctcgtctgccgacgaagccgaagatgcgctgcagaacgcactggcatcggtt
tggatggcgcgagccaagctcgatcctcgcaagcctgtagcagcctatctgacaaccgtg
acgctcaacaaatgccgcgaccggctcaggcgccaaaaggttgtgcggctgctgagtttg
agggccctaggtcccgacgttgccgttgcggcagacgaacccggtcctgatgttgagatc
gccgaccggcaattgctcgctcaggtcaccaacgcgatagatcgcttgccgctccgcctt
cgcgaggctcttgttttggtcgccatcgaggggcgaagccatggcgaggttgctaaattg
ttgggagtgacggaaaaatcggtcgaaacacgtgtgtatcgggcccgtcagcgcctgcgc
aataagatcgattttctttga
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