Novosphingobium pentaromativorans: JI59_09980
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Entry
JI59_09980 CDS
T03399
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_09980
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_09980
Enzymes [BR:
npn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JI59_09980
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Topoisomerases
JI59_09980
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JI59_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
ACAD9-ACADV_C
Motif
Other DBs
NCBI-ProteinID:
AIT80073
LinkDB
All DBs
Position
2080465..2082972
Genome browser
AA seq
835 aa
AA seq
DB search
MASEPENGKNTNSYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDLVLIELNPDGSVSVEDNGRGIPTDIHAEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEWLELTVWRDGKEHWMKFAHGDAVSPLEVRGPAPEGKKGT
RVTFLASTDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLRDRRHEEIVEHDLFYEGGIG
AFVQFLDRNKQALMPDPIAISADKDGIGMEVALEWNDSYYENVLCFTNNIPQRDGGTHLA
AFRAALTRTLNGYAERSGLLKKEKVSLSGDDMREGLTAIVSVKLPDPKFSSQTKDKLVSS
EVRQPLEALMSEKMSEWLEENPATAKTIVQKVIDAAAAREAARRARELTRRKGAMDIASL
PGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRKTQAILPLKGKILNVERARFDRIIS
SKEVGTLIQAMGTGIRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFHRQMPEIIRA
GHLFIAQPPLYKVAKGRSEVYLKDNAALDRYLVEGGLNGRVLETAGGARSGPDLESLVEH
AIRMRNLMAFVPRRYDTNIIEALALAGVLAPDLTSDAREAAMTRAAAWLDRGDTEARWTV
SMSPEGNLEVERLWRGVTDHHKIEAAFLTSAEARKLARLAAENVDVYANAARLVRATAVA
ETAEPEETNDDEGETSAARPVVGEDAITRPSELLEKVLSTGRKGLSIQRYKGLGEMNAEQ
LWETTLDPENRALLQVKVEDADVTDEIFTRLMGDIVEPRREFIQENALNVANLDV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaacccgaaaacggcaagaacaccaactcctacggcgcagactcgatcaag
gtcctcaagggcctcgacgcagtgcgcaagcgccccggcatgtacatcggcgacaccgac
gacggctcgggtctccatcacatggttttcgaggtttccgacaacgcgatcgacgaggcc
ctggccgggcactgcgatctcgtcctcatcgagctgaaccccgatggctcggtctcggtc
gaggacaacggccgcggtattcccaccgacattcatgccgaggaaggcgtttcggcggcc
gaggtcatcatgacccagctccacgccggcggcaagttcgagaacacctcggacgacaat
gcctacaaggtttccggcggtctgcacggcgtcggcgtctcggtggtcaatgccctgtcc
gaatggctggagctcaccgtctggcgcgacggcaaggagcactggatgaagttcgcccat
ggcgacgccgtctccccgctggaagtgcgcgggcccgctccagaaggcaagaagggcacg
cgcgtgaccttccttgcttccaccgacacgttcaagaacgtgaccgaattcgacttcgag
aagctggagcaccgctaccgcgaactcgcgttcctcaattcgggcgtacgtatcaagctg
cgcgaccgccgccatgaggaaatcgtcgagcacgacctgttctacgaaggcggcatcggt
gcattcgtgcagttcctcgaccgcaacaagcaggcgttgatgcccgatcctatcgccatt
tcggcggacaaggacggcatcggcatggaagtcgcgctcgaatggaacgattcctattac
gagaacgtattgtgcttcaccaacaacatcccgcagcgtgacggcggcacccatctcgca
gctttccgcgccgcgctgacccgcacgctcaacggctatgccgaacgctcggggctcctc
aagaaggaaaaggtctcgctttcgggcgacgacatgcgcgaaggcctgaccgcgatcgtt
tcggtgaagctgcccgatcccaagttctcctcgcagacgaaggacaagctggtcagctcc
gaagtgcgtcagccgctcgaggcgctgatgagcgagaagatgagcgagtggctggaggaa
aaccccgccactgccaagaccatcgtccagaaggtgatcgacgccgccgccgcccgcgaa
gcggcgcgccgtgcccgcgaactgacccgccgcaagggcgcgatggacatcgccagcctg
cccggcaagctggccgactgccaggaacgcgatccgtccaaatgcgaactgttcctggtc
gagggtgattccgccggcggttcggccaagcagggccgcgaccgcaagacccaggcgatc
ctcccgctcaagggcaagatcctcaacgtcgagcgcgcgcgcttcgaccgcatcatttcc
tccaaggaagtgggcacgctgatccaggccatgggcaccggcatccgcgacgacttcaac
ctcgaaaagctgcgctaccacaagatcgtcatcatgaccgacgccgacgtcgacggcgcg
catatccgcaccctgctgctgacgttcttccatcgccagatgcccgagatcatccgcgcc
gggcacctcttcatcgcccagccgccgctctacaaggtcgccaagggccgcagcgaagtc
tacctcaaggacaatgccgcgctcgaccgctacctcgtcgaaggcggactcaacggccgc
gtgctggaaacggcgggcggcgctcgcagtgggccggacctcgaatcgctggtcgaacat
gccatccgcatgcgcaacctgatggccttcgtgccgcgccgctatgacaccaacatcatc
gaggccctggcccttgccggcgtgctcgcgcccgacctgacgagcgacgcacgcgaggca
gccatgacgcgcgcggcggcctggctcgatcgcggcgacaccgaagctcgctggaccgtg
agcatgagccccgagggcaatctcgaggtggagcgcctgtggcgcggcgtcaccgatcac
cacaagatcgaggctgccttcctcaccagcgccgaggcccgcaagctggcccgtctcgcc
gccgagaacgtcgacgtctatgccaatgccgcccgcctcgtgcgcgctacggccgtggcc
gagacggccgagcccgaggagacgaacgacgacgaaggcgaaacgagcgcagcgcgtcca
gtggtcggcgaggatgccatcacccggccgagcgaactgctcgagaaggtgctcagcaca
ggccgcaagggtctctcgatccagcgctacaagggtcttggcgaaatgaatgcggagcag
ctgtgggagaccacgctcgatccggagaaccgcgccctgctgcaggtcaaggtcgaggac
gcggacgtgaccgacgagatcttcacccgtctgatgggcgacatcgtcgaaccgcgccgc
gaattcatccaggaaaacgcgctcaacgtcgccaacctcgacgtctga
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