Novosphingobium pentaromativorans: JI59_10100
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Entry
JI59_10100 CDS
T03399
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JI59_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_10100
Enzymes [BR:
npn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI59_10100
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JI59_10100
RecFOR pathway proteins
JI59_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_17
AAA_22
nSTAND3
AAA_16
Sigma54_activat
AAA_14
AAA_18
Rad17
TsaE
AAA_2
NTPase_1
RNA_helicase
AAA_33
Bac_DnaA
AAA_28
AAA_25
NB-ARC
AAA_24
NACHT
IstB_IS21
ABC_tran
Parvo_NS1
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
AIT80095
UniProt:
G6ECC6
LinkDB
All DBs
Position
complement(2114438..2115475)
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AA seq
345 aa
AA seq
DB search
MTDNPILTSSRQPEDADAALRPKTLEEFVGQAGAKDNLRIFIESAKSRREAMDHVLFFGP
PGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEQGDVLFIDEIHRLNPVVE
EVLYPAMEDRALDLIIGEGPSARSVRIDLPPFTLIGATTRQGLLQTPLRDRFGIPVRLQF
YTVPELEHVVTRGAGLLGIGMDKGGATEIARRSRGTPRVAGRLMRRVRDFAHVAGSDVIT
RAIADDALTRLEVDSIGLDAQDRRYLHMIADIYKGGPVGVETLAAGLSEPRDTIEEVIEP
YLIQLGLVARTARGRCLNDLGWKHLGLTPPAGPQGGLFDSEQSTD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaccccatcctcacttcgtcccgtcagcccgaggatgccgacgcggcgctg
cgtcccaagacgcttgaggagttcgtcggacaggcgggcgccaaggacaacctgcgcatc
ttcatcgagtctgccaagtcgcggcgcgaggcgatggatcacgtgctcttcttcggccct
ccggggctgggcaagaccacgctggcgcagatcgtcgcgcgcgaactgggcgtgggcttt
cgtgccacctccggcccggtgatcgcgaaagcgggcgacctcgccgcgctgctgaccaat
ctggaacagggggacgtcctgttcatcgacgagattcaccggctaaacccggtggtagag
gaagtgctctatccggcgatggaggaccgtgccctcgatctcatcatcggcgaggggcct
tccgcgcgctcggtgcgaatcgacctgccgcctttcaccctgatcggcgcgacgacccgg
caggggctgctgcagacgcccttgcgcgaccgtttcggcatccccgtgcgcctgcagttc
tacaccgtgcccgagcttgaacatgtcgtcacgcgcggcgcgggactgctgggcatcggc
atggacaagggcggggcgaccgagatcgcccgccgttcgcggggaacgccgcgcgtggcc
gggcggctgatgcgccgggtgcgcgacttcgcacatgtcgcgggaagcgatgtcattacc
cgcgccattgccgacgatgcgctcacccggctcgaagtcgattcgatcggcctcgatgcg
caggaccggcgctacctccacatgatcgccgacatctacaagggcggtccggttggcgtc
gagacgctggccgcgggcctctcggagccgcgcgacacgatcgaggaggtgatcgagccc
tatctgatccagctcggcctcgtcgcgcgcacagcgcgcgggcgttgcctcaacgatctg
ggctggaagcatctgggattgacgccgcccgcagggccgcagggcgggcttttcgattcg
gagcaatcgactgactag
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