Novosphingobium pentaromativorans: JI59_10415
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Entry
JI59_10415 CDS
T03399
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JI59_10415
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npn01007
]
JI59_10415
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npn03016
]
JI59_10415
Enzymes [BR:
npn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
JI59_10415
Amino acid related enzymes [BR:
npn01007
]
Aminoacyl-tRNA synthetase
Class II (U)
JI59_10415
Transfer RNA biogenesis [BR:
npn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JI59_10415
Prokaryotic type
JI59_10415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AIT80158
UniProt:
G6EC57
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All DBs
Position
complement(2171982..2174396)
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AA seq
804 aa
AA seq
DB search
MKFSLVWLKRYIETEATVEEVAATLNAIGLEVEGIEDPAARLAGFRVARVLTAARHPDAD
KLQVLTVDTGDGDPLQVVCGAPNARAGLVGVLGLPGATVPANGMVLKVAAVRGVESNGMM
CSTRELELGDDHDGIIELPEDAPVGTDFAAYHGASPIIEVAITPNRPDCMGLFGIARDLA
AAGLGTLKPMKVEPVEGTFPCPVEIRTDDPEGCPAFYGRVIKGVKNGPSPQWLQDQLLSA
GQRPISALVDITNYLMLGHGRPAHAYDLARLSGPVVARRARDGETVVALNEKSYTLDGEM
TVIADDSGVHDIAGIMGGEHSGCSDETTDVLLEIAYFDPVRIAKTGRKLNLTSDARSRFE
RGIDPQFLDTGLDYLTTLIQMICGGEASHVVRAGAAPATPRIVHFEPGLTEQLGGVVVKP
EEQQRILEALGFSVVVEEANFDKAWAVTVPGWRPDIDGAPDIVEEVVRIHGLDKVESVAL
PRADGVALPTATAMQQLERRVRRAAAARGMHEAVTWSFLPEAEAAAFADGEGPLWTLSNP
ISEDMKVMRPSLLPGLLSAARRNLDRGAASLRLFEIGRRYLRGKAGMSDERLTLGVVLAG
EKTPRGWASGKATAFDAFDAKGEVLALLAEAGAPADKLQVMGEAGPQFHPGQSATLRLGP
KNVLARFGMIHPGVAKQFDIDGPVALAEIYLDAIPAKKGAASFARIKYAPPALQAITRDF
AFLVPAETPAGDLVRLVQGADKANIVSARLFDDFRGTGVPEGQKSLALEVTLQPQEKSYK
EEDLKAIADKVTAAAAKLGAVLRG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcgctcgtctggctcaagcgctacatcgaaaccgaagcgaccgtcgaggaa
gtggcggcaacgctcaatgccatcggccttgaagtcgaaggcatcgaagacccggccgcc
aggctcgccggcttccgcgtcgccagggtcctgactgccgcgcgtcatccagatgccgac
aagctgcaggtgctgacggtcgataccggagacggcgatccgcttcaggtggtctgcggt
gcgcccaatgcgcgcgccggcctcgtcggcgtgctgggactgcccggcgcgacggttccg
gccaacggcatggtgctcaaggttgccgcggtgcgcggcgtcgaatcgaacggcatgatg
tgctccacgcgcgagctggagctgggcgatgaccacgacggcatcatcgaattgcccgaa
gatgcgccggtcggcaccgatttcgccgcctatcacggcgccagtccgatcatcgaagtg
gcgatcacgcccaaccggcccgactgcatggggctcttcggcattgcccgcgatctggcc
gcggccggtctcggcacgctcaagccgatgaaggtggagcctgtcgaaggcacgttcccg
tgcccggtcgagatccgcaccgacgatccggaaggctgtccggccttctacggccgcgtc
atcaagggcgtgaagaacggcccgtcgccgcagtggctgcaggaccagctgctctcggca
ggtcagcgtccgatttcggcgctggtcgacatcaccaattatctcatgcttggccacggc
cgcccggcccatgcctacgatctggccaggctttccggtcccgtggtcgcccgccgcgcc
cgcgatggagagaccgtcgttgcgctgaacgagaagagctacacgctcgatggcgagatg
accgtgatcgccgacgacagcggcgtgcatgacattgccggcatcatgggcggcgagcat
tcgggctgttcggacgagacgaccgacgtcctgctcgagatcgcctatttcgatccggtc
cgcatcgccaagacggggcgcaagctcaatctcacctcggatgcgcgcagccgcttcgag
cgcggcatagatccgcagttcctcgataccggtctcgattacctgacgacgttgatccag
atgatctgcggcggtgaggcttcgcacgtggttcgcgccggtgcggcgccggctacgccc
aggatcgtccatttcgagcccggtctgacagagcagctcggcggcgttgtggtgaagccg
gaggagcaacagcgaatcctcgaggcgctgggcttctcggtggtcgtcgaggaagcgaat
ttcgacaaggcctgggccgtgactgtcccgggctggcgtccggatatcgacggcgcgccc
gacatcgtcgaggaagtggtgcgcattcacgggctcgacaaggtggagagcgtggccctg
ccgcgtgccgacggtgtcgccctgccgaccgccacggccatgcagcagctcgaacgccgc
gttcgccgcgctgccgcagcgcgcgggatgcatgaggcggtgacctggtcgttccttccc
gaagcggaagcggcagcctttgccgatggcgagggccccctttggaccttgtccaatccg
atcagcgaggacatgaaagtcatgcgcccttcgctgctgccgggcctgctttccgccgct
cgccgcaatctggaccgcggcgccgccagtctgcgcctgttcgagattggccgccgctat
ctgcgcggcaaggcgggcatgagcgacgagcgcctgaccctcggtgtggtgcttgcaggc
gagaagacgccgcgcggctgggcatcgggcaaggcgactgccttcgacgccttcgacgcc
aagggcgaagtgctggccctgcttgccgaagcaggcgcccctgccgacaagctccaggtc
atgggtgaggccgggccgcagttccatcccggccaatcggccacgctgcgccttgggccc
aagaacgtgctggcccggttcggcatgatccatcccggggtggcgaagcagttcgacatc
gacgggccggtggccctggccgagatctatctcgacgccatcccggcgaagaagggcgcg
gccagtttcgcccgcatcaaatatgcgccgcctgcgctccaggcgatcacgcgcgacttc
gccttcctcgtgccggccgaaacgcccgcgggcgatctcgtgcggctggtgcagggtgcg
gacaaggccaacatcgtctcggcccggctcttcgacgatttccgcggcacgggcgttccc
gagggacagaagtcgctggcccttgaagtgacgctccagccgcaggagaagagctacaag
gaagaagacctcaaggcgattgccgacaaggtaaccgccgcggccgccaagctcggggcc
gttcttcgcggctga
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