Novosphingobium pentaromativorans: JI59_10615
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Entry
JI59_10615 CDS
T03399
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_10615
03036 Chromosome and associated proteins [BR:
npn03036
]
JI59_10615
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_10615
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JI59_10615
Chromosome and associated proteins [BR:
npn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JI59_10615
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JI59_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AIT80197
UniProt:
G6EC15
LinkDB
All DBs
Position
2214724..2215005
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLQALAKDNPELRSEDVERALDTFFDEIAQRLADGGRVELRGFGAFSTRHRDSRK
GRNPRTGETVEVPEKKVPYFKPGKEMRAKLNVS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtcggaactgctgcaggccttggccaaggacaatcccgaattgcgaagcgaa
gacgtcgagcgcgcgctcgataccttcttcgacgagatcgcgcagcgccttgccgatggc
ggccgcgtcgaactgcgcggcttcggcgccttttccactcgccaccgtgacagccgcaag
ggccgcaacccgcgcaccggcgaaaccgtggaagttcccgagaagaaggtgccgtatttc
aagcccggcaaggaaatgcgcgcgaagctgaacgtcagctaa
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