Novosphingobium pentaromativorans: JI59_11570
Help
Entry
JI59_11570 CDS
T03399
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npn03016
]
JI59_11570
03036 Chromosome and associated proteins [BR:
npn03036
]
JI59_11570
Transfer RNA biogenesis [BR:
npn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JI59_11570
Prokaryotic type
JI59_11570
Chromosome and associated proteins [BR:
npn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JI59_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
FAD_oxidored
GIDA_C_1st
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Pyr_redox
NAD_binding_9
FAD_binding_2
Lycopene_cycl
DAO
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIT80373
LinkDB
All DBs
Position
complement(2405245..2407092)
Genome browser
AA seq
615 aa
AA seq
DB search
MLAFDVIVIGGGHAGCEAAAVAGRMGARVALVSFDLDAVGAMSCNPAIGGLGKGHLVREV
DAFDGLIARAADAAAIHYRMLNRSKGSAVQGPRIQADRRLFKAAIHRLLKEQGDLTLVAG
EAAALVFDGERVVGIDLAGGERLMARAVILCTGTFLGGTLFRGEERIVGGRIGEASAQKL
AAQMRGAQLPMARLKTGTPPRLDGRTIDWARLDEQPSDGEFWTMSAMGARRLNPQVFCAI
TRTNLRSHDVIRANLHRSPLFSGAIGALGPRYCPSIEDKIHRFADRDGHQIFLEPEGLGT
HLVYPNGISTSLPADVQLEMLRTMEGLETVEMVVPGYAVEYDHIDPRALRSSLELREMPG
LYCAGQINGTTGYEEAAAQGLVAGMHAAAAVLGKEAPAIDRANSYMAVMIDDLTLHGVSE
PYRMLTARAEYRLRLRANNASTRLTPLGLAVGAVGEARRAWFARREQARAALNGAMDQKP
SASELVAAGLPVRSDAGRMPIREWLRFDGVEITGLTEWVDPALLDDQSLLEEVTEDAAYA
PYLERQERELRELRASDALPLAEDFPYAEIPGLSREMVERLTRARPETLAAAGRIPGITP
AALAALLVHARREAA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcattcgatgtgatcgtgattggcggcggccatgccggctgcgaggcagctgct
gttgccggccgcatgggcgcgcgggtcgccctggttagcttcgatctcgacgctgttggc
gcgatgagctgcaacccggcgatcggcgggctgggcaaggggcacctcgttcgcgaagtc
gatgccttcgatggtctgattgctcgcgcagccgatgcggcggctatccattatcgcatg
ctcaatcgctccaagggcagtgcagtccagggaccccgcatccaggctgaccggcgcctg
ttcaaagcggcgatccatcgtctgctcaaggagcagggcgatctgactctggtcgcggga
gaggcggcggctcttgtgttcgacggtgagcgcgtggtcggcatcgatcttgccggaggc
gagcggctcatggcgcgagccgtcatcctgtgcaccgggacttttctgggcgggactctg
ttccggggtgaggagcgtattgtcggtggccggatcggcgaggcctcggcccagaagctg
gcagcgcagatgcgcggtgctcagctgcccatggcacggcttaagaccgggacgccgcca
cggctcgatggccgcacgatcgattgggctcgtctcgatgagcagccctcggacggcgag
ttctggacgatgtcggcgatgggtgcgcgccgccttaacccgcaggtgttctgtgcgatc
acccgtaccaaccttcgcagccatgatgtcattcgcgcgaatctccatcgctcgcctctc
ttctcgggtgcgataggggccctggggccgcgctactgtccgtccatcgaggacaagatt
catcgctttgccgatcgcgacggccatcagatcttcctcgagccggaagggctggggacg
cacctcgtctatcccaatgggatcagcacctcgcttccggcggacgtgcagcttgaaatg
ttgcggacgatggaaggcctcgagacggtagagatggtcgtgcccggctatgccgttgag
tacgatcacatcgatccacgcgccctgcgttcaagcctcgagctgcgcgagatgcccggg
ctctattgcgctggccagatcaacgggacgactggatacgaggaagcggctgcccaggga
cttgtggcgggcatgcatgctgccgcggctgttcttggaaaagaggccccggccattgat
cgggccaacagctacatggcggttatgatcgacgatctgaccttgcatggtgtcagcgaa
ccttaccgcatgctcactgcgcgcgcggagtatcgtctgcgtctgcgtgcgaataatgct
tcgacgcgtctgacgccgctcggtcttgccgtgggtgccgtcggtgaagcacgtcgcgcc
tggttcgcgcgccgcgagcaggcgagggcggccctcaacggtgcgatggaccagaagccc
tcggcttccgaattggtagcggcgggacttcccgttcgcagcgatgccggacgcatgccg
atccgggagtggttgcgcttcgatggtgtggaaatcaccggtttgaccgaatgggtcgac
cccgcgttgttggatgaccagtcgcttcttgaggaagtcacggaagacgctgcctatgct
ccctatctcgaacggcaggagcgggaactgcgcgagctgcgggcgagcgatgccctgcca
ctcgccgaagattttccttatgccgagatcccgggtctctctcgcgagatggtcgagcgc
ctgacgcgggcccgaccggagaccttggcggcggccggtcgcatccccggaattacccct
gcagccttggctgccctgcttgttcatgcccgtcgggaggctgcttga
DBGET
integrated database retrieval system
