Novosphingobium pentaromativorans: JI59_11915
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Entry
JI59_11915 CDS
T03399
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00061
Fatty acid biosynthesis
npn00071
Fatty acid degradation
npn01100
Metabolic pathways
npn01212
Fatty acid metabolism
npn02024
Quorum sensing
npn04146
Peroxisome
Module
npn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JI59_11915
00071 Fatty acid degradation
JI59_11915
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JI59_11915
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI59_11915
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
npn01004
]
JI59_11915
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npn04147
]
JI59_11915
Enzymes [BR:
npn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JI59_11915
Lipid biosynthesis proteins [BR:
npn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JI59_11915
Exosome [BR:
npn04147
]
Exosomal proteins
Exosomal proteins of breast milk
JI59_11915
Exosomal proteins of breast cancer cells
JI59_11915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AIT80441
UniProt:
G6EBB2
LinkDB
All DBs
Position
2461709..2463514
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AA seq
601 aa
AA seq
DB search
MDLADFDKSTNIVSLFLARADALRDAPMLWSKRGGDWISLSWAQVAREVCLIAQSLRQMG
LKAGDRVVIVSENRPEWCIADLGIMAAGCVTVPTYTTNTVRDHIHILENSGARAAIVSTE
KLARQLLPAIVQTDLCRHVVGMERVPGMQGGVYETYDWDALLTGDPVAARAEAEARLVDV
NRQDLACIIYTSGTGGAPRGVRQHHGMLLTNIAGAAEIIRDDFGWDAGETFLSFLPLSHA
YEHTGGQFFPIGLGGQIYYAEGLDKLASNIEEVRPTIMVVVPRLFEVLRTRIMKQIEKQG
ALPARLMHLALAVAARKAAGQRRLTDYPLDLLLEHTLRPKIRARFGGRNKALVSGGAPLN
PEIGVFFDAMGLTLLQGYGQTEAGPVISCNRPAAGLAMDTVGPPLRGVEVRIAEDGEILT
RGELVMHGYWQNEAASANVLIEGWLHTGDIGHFDDAGRIRITDRKKDMIVNDKGDNISPQ
KVESMLTLQPEIAQAMVSGDRRPYAVALIVPDADWALEWSRLNDIPFDIRALQDLPVFRN
AIRGAIDRVNADLSVIEKVRQFVFADEPFSIENEMMTPSLKIRRHKVREAYGERIDLLYR
N
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgccgatttcgacaagagtacgaacatcgtttcgctgttcctggcgcgcgcg
gacgccctgcgcgatgccccgatgctgtggagcaagcgcggcggcgattggatttcgctc
agctgggcgcaagtggcgcgcgaggtctgcctgatcgcgcaatcgctgcggcagatgggc
ctcaaggcgggcgaccgggttgtcatcgtctcggaaaaccggcccgaatggtgcatcgcc
gatctcggcatcatggcggccggctgcgttaccgtgccgacctacacgaccaataccgtg
cgcgatcacatccatatcctcgaaaattcgggtgctagggctgcgatcgtctcgaccgag
aagctggcgcgccagcttctgccggccatcgtccagaccgacctgtgccgccatgtcgtg
gggatggagcgggtcccggggatgcagggcggcgtttacgagacctacgattgggacgcg
ctcctcaccggcgatccggtggcggcgcgcgccgaggctgaggcgcggctggtggacgtc
aaccggcaggacctggcctgcatcatctacaccagcggcaccggcggagcgccgcgcggg
gtgcgccagcatcacggcatgttgctgaccaacatcgccggcgcggcggagatcatccgc
gacgatttcggctgggatgccggagagaccttcctgtccttcctcccgctcagccatgcc
tatgagcacaccggcgggcagttcttcccgatcggcctgggcggacagatctactacgcc
gagggcctcgacaagctggcgtccaatatcgaggaagtgcgcccgacgatcatggtcgtc
gtgccgcgcctcttcgaagtcttgcgcacgcgcatcatgaagcagatcgaaaagcagggt
gccctgcccgcgcggctgatgcatctggcgctggccgtggcggcgcgcaaggcggccggg
caacggcgcctgaccgactatccgctggacctgctgctcgaacataccctgcggcccaag
atccgcgcgcgcttcggcgggcgcaacaaggcgctggtttccggaggcgcgccgctcaat
cccgaaatcggcgtatttttcgatgcgatgggcctgaccctgctgcagggctatggccag
accgaggccggtccggtgatcagctgcaaccggcccgcggcggggctggcgatggatacc
gtgggcccgcccttgcgcggggtcgaggtccggattgccgaggatggcgagatcctgacc
cgcggcgaactggtcatgcatggctactggcagaacgaggcggcctcggccaatgtcctg
atcgaaggctggctgcataccggcgacatcggccatttcgacgatgccgggcggatcagg
atcaccgaccgcaagaaggacatgatcgtcaacgacaagggcgacaacatctcgccccag
aaagtcgaatcgatgctgaccctgcagccggaaatcgcgcaggccatggtcagcggcgac
cggcggccctacgccgtcgcgctcatcgtacccgatgcggactgggcgctggagtggagc
cgtctcaacgacattcccttcgacatcagggcccttcaggacctgcccgtgttccgcaac
gcgatccgcggcgccatcgaccgggtcaatgccgatctctctgtcatcgaaaaggttcgc
cagttcgtcttcgccgacgaaccattctcgatcgagaacgagatgatgacgcccagcttg
aagatccgtcgccacaaggtgcgcgaggcctacggcgagcggatcgaccttctctaccgc
aactga
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