Novosphingobium pentaromativorans: JI59_12545
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Entry
JI59_12545 CDS
T03399
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00250
Alanine, aspartate and glutamate metabolism
npn00310
Lysine degradation
npn00350
Tyrosine metabolism
npn00650
Butanoate metabolism
npn00760
Nicotinate and nicotinamide metabolism
npn01100
Metabolic pathways
npn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JI59_12545 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JI59_12545 (gabD)
00310 Lysine degradation
JI59_12545 (gabD)
00350 Tyrosine metabolism
JI59_12545 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JI59_12545 (gabD)
Enzymes [BR:
npn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JI59_12545 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JI59_12545 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JI59_12545 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIT80546
UniProt:
G6EB04
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Position
complement(2590698..2592152)
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AA seq
484 aa
AA seq
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MAYTDFLKQQCYIDGKWCDADSGATFEVTDPGSGKVLGTVPKMGKDETARAIDAAEAALP
GWRAKTAGERAKLMRKLYELMMEHQDDLGELLSREQGKPFAEGKGEIAYGASFIEWFGEE
GKRAYGDVIPSHAADRRIVVIKQGVGVVGAITPWNFPNAMITRKLGPALAAGCTIVIKPA
SATPYSALAIAALCEMAGIPAGVVNVVTGSAGQIGSELTGNPKVAKITFTGSTEIGRDLL
RESAETIKKCSMELGGNAPFLVFDDADVDAAIDGAMISKFRNGGQTCVCTNRFYVQDGVY
DEFVDKLAKRVSAMKVGYGMDSGTEIGPLIDEKAVEKVEEHLEDAKAGGATVLAGGQRNA
LGGSFFNPTVVAGVKPDMKIAREETFGPLAGVIRFKDEADAIAMANDTEFGLASYFYARD
LSRVWRVAEALEAGMVGINTGLISTEVAPFGGVKQSGLGREGSHYGLDDFMEVKYLCMGI
QPSA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcctacaccgacttcctcaagcagcagtgctacatcgacggcaagtggtgcgacgca
gattcaggggccaccttcgaagtgaccgatcccggcagtggcaaagtgctgggcaccgtg
ccgaagatgggcaaggacgagaccgcgcgcgccatcgatgccgcggaagccgccctgccc
ggttggcgcgccaagaccgccggtgagcgcgccaagctcatgcgcaagctctacgaactg
atgatggagcatcaggacgacctgggtgaactgctcagccgcgaacagggcaagcccttc
gccgaaggcaagggcgaaatcgcctatggcgccagcttcatcgaatggttcggcgaagag
ggcaagcgtgcctatggcgacgtcatccccagccatgccgcggatcgccgcatcgtcgtg
attaagcagggcgtcggcgtcgtgggcgcgatcacgccctggaactttcccaatgcgatg
atcacccgcaagctcggcccggcgctggcggcgggctgcaccatcgtcatcaagccggcg
tcggccacgccctactcggcgcttgccattgccgcgctgtgcgagatggcgggcattccg
gcgggcgtcgtcaacgtcgtcaccggcagcgcgggccagatcggttcggaactgaccggc
aatcccaaggtcgccaagatcaccttcaccggatcgaccgagatcggccgcgacctgctg
cgcgagagcgccgagacgatcaagaagtgctcgatggaactgggcggcaatgcgccgttc
ctggtcttcgacgatgccgatgtcgatgccgcgatcgacggcgcgatgatttccaagttc
cgcaacggcggccagacctgcgtgtgcaccaaccgcttctacgtgcaggacggcgtctat
gacgagttcgtcgacaagctggccaagcgggtttcggcgatgaaggtcggctacggcatg
gactccggcacggaaatcggcccgctgatcgacgagaaggcggtcgagaaggtcgaggag
catctcgaggatgccaaggccggcggcgctaccgttctcgcgggcggacagcgcaatgcg
ctgggcggcagcttcttcaacccgaccgtggtcgcaggcgtgaagcccgacatgaagatc
gcgcgcgaagagactttcggcccgctcgcaggcgtcatccgcttcaaggacgaggcggac
gccatcgccatggccaacgacaccgaattcggcctcgccagctatttctatgcacgcgac
ctcagccgcgtgtggcgcgtcgccgaagcgctggaggcgggcatggtcgggatcaacacc
ggcctgatctccactgaagtcgcccccttcggaggggtcaagcaatcgggactgggccgc
gagggttcgcactacggcctcgatgacttcatggaagtgaagtacctgtgcatgggcatc
cagcccagcgcctga
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