Novosphingobium pentaromativorans: JI59_12990
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Entry
JI59_12990 CDS
T03399
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00071
Fatty acid degradation
npn00362
Benzoate degradation
npn00650
Butanoate metabolism
npn01100
Metabolic pathways
npn01120
Microbial metabolism in diverse environments
npn01200
Carbon metabolism
npn01212
Fatty acid metabolism
Module
npn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JI59_12990
09103 Lipid metabolism
00071 Fatty acid degradation
JI59_12990
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JI59_12990
Enzymes [BR:
npn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JI59_12990
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
DAO
NAD_binding_2
ECH_2
GIDA
UDPG_MGDP_dh_N
F420_oxidored
ApbA
Pyr_redox_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AIT80620
UniProt:
G6EAN2
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All DBs
Position
2684528..2686852
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AA seq
774 aa
AA seq
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MNDIIRKVCVIGAGTMGAGIAAQVANAGVPVVLLDIVPKDGENRNAIAEGAVARMLKTEP
APFMSKAAAKLVETGNIEDHLDKVAECDWVIEAVIERLDIKQGLYAKLEAVKREGTAVSS
NTSTIPLAHLVEGRSDGFKRDFLITHFFNPPRYMRLLEIVTGPATDAAVADKVERFADVA
MGKTVVHAKDTPGFIANRIGTYWIQLGLNAAFDMGLTVEQADAIAGKPMGVPKTGIFGLV
DLVGIDLMPHLQASLTSTLPKDDPYQEIARSHPLIEKLISEGFTGRKGKGGFYRLNRDMG
RRKEALDLATGEYREKTSARGPSGRAAKGDLRALVETRGAVGEYAWAILGGTLAYAAALV
PSAAADVVAVDDAMKLGYNWKSGPFEMIDTLGAQYLAERLEAEGKPVPEILRLAGERTFY
RIEDGKRQFLGLDGEYHDVVRPEGVLRLADIKLASGPLLKNGSAALWDVGDGVACLEFTG
KMNALDGDVMKLIVEAIPLVSARFKALVVYNDADSFSAGANLGLALFAINIAAYGEVEKL
VAGGQMAYKGLKYAPFPVVGAPAGLAVGGGCEILLHCDAIQAHAELYTGLVECGVGLIPG
WGGNGEMIDRARKAPMMPKGPMPAVAKVFETVSTATVSKSAAQAKEMLFLRPDDGITMNR
DRLLHDAKQKALSLVEGYAPPEAPEFRLPGEGGHVALNMAAQGFHKRGMATDYDMVVSDA
LATVLTGGEADLVDTVSEQELLKLERETFMRLVREPRSIARVEHMLETGKPLRN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatcatccggaaagtctgcgtcatcggcgccggtaccatgggtgccggaatc
gccgcccaggtcgccaatgccggcgtgccggtcgtcctgctcgacatcgtccccaaggac
ggcgagaaccgcaacgccatcgccgaaggcgcggtggcgcgcatgcttaagaccgagccg
gcgcccttcatgtcgaaggctgcggccaagctggtcgagaccggcaacatcgaggaccat
ctcgacaaggtcgccgaatgcgactgggtgatcgaggcggtgatcgagcggctcgacatc
aagcagggcctctatgccaagctggaagcggtcaagcgcgagggtacggcggtctcgtcg
aacacgtcgaccatcccgctcgcccatctcgtcgaagggcgctcggacggcttcaagcgc
gatttcctgatcacccacttcttcaatccgccgcgctacatgcgcctgctggaaatcgtt
accggtcccgcgaccgatgcggccgtggcggacaaggtggagcgcttcgccgatgtcgcg
atgggcaagacggtggtccatgccaaggacacgccgggcttcatcgccaatcgcatcggc
acgtactggatccagctaggcctcaatgccgctttcgacatggggctcaccgtcgagcag
gccgacgcgatcgccggcaagccgatgggcgtgcccaagaccggcattttcggtctggtc
gatctcgtgggcatcgacctgatgccgcacttgcaggcgagcctgacttccacgctgccc
aaggacgatccctatcaggagatcgcgcgcagccatccgcttatcgagaaattgatttcc
gagggattcaccggccgcaagggcaagggcggtttctaccgcctcaatagggacatgggt
cgccgcaaggaggctcttgaccttgcgaccggtgaataccgcgagaagaccagcgcccgc
ggcccttcgggtcgcgcagccaagggggacctgcgggcgctggtcgaaaccaggggcgcg
gtgggcgaatatgcctgggcgatcctgggcgggacgctggcttatgccgccgccctggtg
ccgtctgccgccgccgatgtcgtggccgtcgatgatgccatgaagctgggctacaactgg
aagtccgggccgttcgaaatgatcgacacgctgggcgcgcagtatcttgccgaaaggctc
gaggctgaaggcaagcccgttcccgagatcctcaggctggcaggagagcgcaccttctat
cgcatcgaggacggcaagcgccagttccttggccttgacggcgagtatcacgatgtcgtg
cgccccgaaggcgtgctgcgtctcgcggacatcaagctggcctccgggccgctgctcaag
aacggctcggcggccctgtgggatgtcggcgacggagtggcctgcctcgaattcaccggc
aagatgaatgcgctcgacggcgacgtgatgaagctgatcgtcgaggcgatcccgctcgtt
tccgccaggttcaaggcgcttgtcgtctataacgacgccgacagcttctcggctggcgcc
aacctcgggcttgccctcttcgcgatcaatatcgccgcctatggcgaggtcgagaagctc
gtggccggcgggcagatggcctacaagggcctcaagtacgcgcccttcccggtggtggga
gcacctgccggtctggccgtgggcggcgggtgcgagatcctgctgcactgcgatgcgatc
caggcccatgccgaactctacaccggcctcgtcgaatgcggtgtcggcctgatccccggc
tggggcggcaatggcgagatgatcgaccgcgcgcgcaaggcgcccatgatgcccaagggg
ccgatgcccgccgtcgccaaggtgttcgagacggtctcgaccgcgactgtttccaagtct
gcggcgcaggcgaaggaaatgctgttcctgcggccggatgacggcatcaccatgaaccgc
gaccgcctgcttcacgatgccaagcagaaggcgctttcgctggtggaaggctacgctccc
cccgaagcgcccgagttcaggttgccgggcgagggcgggcacgtcgcgctcaacatggcg
gcgcaaggcttccacaagcgcggaatggcgaccgattacgacatggtcgtttccgatgcc
ctggccaccgtgctgaccggaggagaggccgacctcgtcgatacggtgagcgagcaggaa
ctgctcaagctggagcgcgagaccttcatgcggctggttcgcgaaccgcgctcgatcgct
cgggtcgagcatatgcttgaaaccggcaagccgctgcgcaactga
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