Novosphingobium pentaromativorans: JI59_14105
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Entry
JI59_14105 CDS
T03399
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00030
Pentose phosphate pathway
npn01100
Metabolic pathways
npn01120
Microbial metabolism in diverse environments
npn01200
Carbon metabolism
Module
npn_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
JI59_14105
Enzymes [BR:
npn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
JI59_14105
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Paralog
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AIT80828
UniProt:
G6EA29
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All DBs
Position
complement(2941586..2943400)
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AA seq
604 aa
AA seq
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MTDLAPAVARVTDRIIERSKDSRARYLDLVAREADRHSDRSFLSCSNLAHGFAAAGEDKS
AIATGSANNLAIVTAYNDMLSAHQPYGRYPEQMKLWAREVGATAQVAGGVPAMCDGVTQG
FDGMELSLFSRDTIAMSTGIAMSHAMFDGMALLGICDKIVPGLMIGALRFGHLPAVFVPS
GPMPSGISNKEKQKTRQLYAEGKATREDLLASESASYHSAGTCTFYGTANSNQMMMEMMG
LHMPGAAFVPPNTPLRQALTRAAVHRLAGMGRKSEDYRPMAQVVNEKAIVNACVGLLATG
GSTNHAIHLPAMARAAGVILDWDDLSELSAAVPLITRVYPNGSGDVNHFHAAGGMAWVVR
ELLDAGLAHEDVLTVSPGGMRDYAQEPVLMDEALAWTSAPAKSGDDTMLRPVSEPFQPDG
GMRLVSGNLGRATFKTSAVDKERWTIEAPCRVFETQEAVAQAFKNGELDKDVVVVVRFQG
PRANGMPELHKLTPPLGVLQDRGHKVALVTDGRMSGASGKVPAAIHVTPEALGGGPLSLL
RDGDVVRLSAEDGTLETTADLSARQPAPAPAAEMGMGRELFAMFRMSAGGAEQGGSAMLE
VAGL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccccggcagtggctcgggttaccgaccgcatcatcgagcgctcgaag
gacagccgcgcccgatatctcgatctcgtcgcgcgcgaggccgaccggcactcggaccgc
agcttcctctcgtgctctaacctggcccacggatttgccgcggccggcgaggacaagtcc
gccatcgccaccggcagcgccaacaacctggcgatcgtcaccgcctacaacgacatgctt
tcggcccaccagccctatggccgctatcccgagcagatgaagctgtgggcccgcgaagtg
ggcgcgacggcgcaagtcgccggcggcgtgcccgccatgtgcgacggcgtcacccagggc
ttcgacggcatggaactttcgctgttcagccgcgataccattgccatgtccaccggcatc
gccatgagccacgccatgttcgacggcatggccctgctcggcatttgcgacaagatcgtg
cccggcctgatgatcggcgcgctgcgcttcggccacctgcccgccgtcttcgtgccgtcg
ggccccatgcccagcggcatctccaacaaggagaagcagaagacccgccagctctacgcc
gaaggcaaggccacgcgtgaggacctgctcgccagcgagagcgccagctaccattcggcc
ggcacctgcaccttctatggcactgccaactccaaccagatgatgatggagatgatgggc
ctgcacatgccgggcgccgccttcgtcccgcccaacacgccgctgcgccaggcgctcacc
cgcgccgccgtccaccgcctcgccggaatgggccgcaagagcgaagactaccgcccgatg
gcgcaggtcgtgaacgagaaggccatcgtcaacgcctgtgtcggcctgctggcgaccggc
ggttccaccaaccacgccatccacctgcccgcgatggcccgcgcggcgggcgtcatcctc
gactgggacgacctgtcggagctgtccgctgccgtgccgctgatcacccgcgtctatccc
aacggctcgggcgacgtgaaccacttccacgcggccggcggcatggcctgggtcgtgcgc
gaactgctcgacgcggggcttgcccacgaggacgtgctgaccgtctcgccgggcggcatg
cgcgactatgcgcaggaaccggtgctgatggacgaggcccttgcctggacttccgctccc
gcgaaaagcggcgacgacaccatgctgcgcccggtttccgaaccgttccagccggacggc
ggcatgcgcctcgtctccggcaatctcggccgcgccacgttcaagacctcggcggtcgac
aaggagcgctggacgatcgaggccccctgccgcgtgttcgaaacgcaggaagccgtggcc
caggcgttcaagaacggcgaactcgacaaggacgtcgtcgtcgtcgtgcgcttccaggga
ccgcgcgccaacggcatgcccgaactgcacaagctgaccccgccgctcggcgtgctgcag
gaccgcggccacaaggttgcactggtcaccgacgggcgcatgtccggcgcatcgggcaag
gttcccgccgcgatccacgtcactcccgaagcgctgggcggcggaccgctctcgctgctg
cgcgatggcgacgtggtgcgcctttcggccgaggacggcactctcgagacgaccgccgac
ctctccgcacgccagcccgccccggcacccgccgcggaaatgggcatgggccgtgaactc
ttcgccatgttccgcatgagcgcgggcggcgccgaacagggcggatcggccatgctcgaa
gtggcaggtctgtga
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