Novosphingobium pentaromativorans: JI59_14830
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Entry
JI59_14830 CDS
T03399
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00730
Thiamine metabolism
npn01100
Metabolic pathways
npn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JI59_14830
Enzymes [BR:
npn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JI59_14830
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIT80964
UniProt:
G6E9N5
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All DBs
Position
3097544..3099424
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AA seq
626 aa
AA seq
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MADINSKLEIGVTTGPIRGSKKIYVPAQSNPSVKVAMREIHLEPSSGEPPVRVYDTSGPY
TDPDAAIDIAAGLPALRREWQLARGDVEEYAPREVKPEDNGQLGPDRSGGVPPFPTALRK
PLRAKAGKNLSQMHYARQGIITPEMEYVAERENLGRARLAEYNRSGESFGAAIPDYVTPE
FVRDEVARGRAIIPSNVNHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIR
WGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEELTWEIFRDTLIE
QAEQGVDYFTIHAGVRLPYIPLAAKRMTGIVSRGGSIMAKWCLAHHKESFLYENFDEITE
IMKAYDIAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKKAWEQDVQVMIEGPGHVPMH
KIKENMEKQLESCGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEH
LGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDT
AEQYHDQTLPAEGAKTAHFCSMCGPKFCSMKISQEVRDFAAKQNQPSTGFLAADEAEKGM
EEMSKVYKEKGNELYLPADEAADAAE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcaattccaagctggaaatcggcgtaaccaccgggcccatccgcggctcg
aagaagatctacgtcccggcccagtcgaacccctcggtcaaggtcgccatgcgcgagatc
catctcgaaccctcgagcggcgagccgccggtgcgcgtctatgacacctcgggcccctac
accgatcccgacgcggcgatcgacattgccgccggtctgcccgcgctgcgccgcgaatgg
cagctcgcccgcggcgacgtggaggaatacgcgccgcgcgaagtgaagccggaagacaac
ggccagctcggcccggatcgttcgggcggcgtgcccccgttcccgaccgcgctgcgcaag
cccctacgcgccaaggccggcaagaacctctcgcagatgcattacgcccgccagggcatc
atcacgcccgagatggaatatgttgccgagcgcgagaatctgggccgggcgcgccttgcc
gagtacaaccgctcgggcgagagcttcggcgccgctatccccgactacgtgacgcccgag
ttcgtgcgggacgaagtggcgcgcggccgtgcgatcatcccttcgaacgtcaatcacccg
gaaagcgagccgatggccatcggtcgcaacttcctggtcaagatcaacgccaacatcggc
aattcggcggtcgcgtcggacgttgccagcgaagtcgacaagatggtctggtcgatccgc
tggggcgcggataccgtcatggatctgtcgaccgggcgcaacatccacgacacgcgcgaa
tggatcatccgcaacagcccggttccgatcggcaccgtgccgatctaccaggcgctggaa
aaggtcgggggcattgccgaggaactgacctgggagatcttccgcgacaccctgatcgaa
caggcagagcagggcgtcgactacttcacgatccacgccggcgtgcgcctgccctacatc
ccgctggcagccaagcgcatgaccggcatcgtcagccgtggcggttcgatcatggccaag
tggtgccttgcccaccacaaggagtcgttcctctacgagaacttcgacgagatcaccgag
atcatgaaggcctacgacatcgcctactcgctcggtgatggcctgcgtcccggctcgatc
tacgacgccaacgacgaggcgcagttcgccgagctctatacgttgggcgaactgaccaag
aaggcctgggagcaggacgtccaggtcatgatcgagggccccggccacgtgccgatgcac
aagatcaaggagaacatggaaaagcagctggaaagctgcggcgaagccccgttctacacg
cttgggccgctcacgaccgacatcgcgccgggctacgaccacatcaccagcggcatcggc
gcggcccagatcggttggtacggcacggcgatgctctgttacgtcacgcccaaggagcac
ctcggcctgcccgaccgcgacgacgtgaaggtcggcgttgtcacctacaagctggcggcc
cacgcggctgacctcgccaagggccacccggctgcgcaggtgcgcgacgatgccctgtcg
aaggcccgcttcgagttccgctggcgcgaccagttcaacctcagcctcgatccggacacg
gcagagcagtaccacgaccagacgcttccggccgaaggcgccaagaccgcgcacttctgc
tcgatgtgcggtcccaagttctgctcgatgaagatcagccaggaagtgcgcgacttcgcc
gccaagcagaaccagccgagcaccggtttccttgccgccgacgaagcggagaagggcatg
gaagagatgtccaaggtctacaaggaaaagggcaacgaactgtacctgcccgccgacgag
gccgccgacgcggccgagtaa
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