Novosphingobium pentaromativorans: JI59_16140
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Entry
JI59_16140 CDS
T03399
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JI59_16140
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npn01007
]
JI59_16140
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npn03016
]
JI59_16140
Enzymes [BR:
npn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JI59_16140
Amino acid related enzymes [BR:
npn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JI59_16140
Transfer RNA biogenesis [BR:
npn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JI59_16140
Prokaryotic type
JI59_16140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
FapA
ZapB
Motif
Other DBs
NCBI-ProteinID:
AIT81203
UniProt:
G6E8W8
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All DBs
Position
complement(3346381..3347661)
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AA seq
426 aa
AA seq
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MHDIRLIRDNPAAFDAGLARRGVEPASAQILALDEQRRAVATRMQEGQNRRNEASKAIGK
AMGQGDKETAEALKAEVAQLKETLPALEAQEKELSARLQDELARLPNIPVDEVPDGEDET
QNVEVAKWGTPREFAFTPKEHADLGPALGLDFETGALLSGARFTFLKGQMARLHRALAQF
MLDTQTADNGYMECNVPLLVKDDAAFGTGQLPKFSEDLFQTTDGRWLIPTAEVSLTNAVR
EQIVDAEALPLRMTALTPCFRSEAGAAGRDTRGFIRQHQFEKVELVTVCKPEESEAEHER
MVAAAEGILQALELPYRKVLLCAGDMGATARKTFDLEVWLPGQSAYREISSISNCGDFQA
RRMNARYKPEGSKKTEFLHTLNGSGLAVGRTLVAVLENYQQEDGSVAVPERLKPWMGGIE
KLEPLA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatatccgcctgatccgtgacaacccggccgctttcgacgccggtctcgcccgc
cgcggggttgaacccgcttccgcccagatcctcgcgctcgacgagcagcgccgcgcggtc
gcgacgcgcatgcaggaaggccagaaccgccgcaacgaggcgtccaaggcgatcggcaag
gcgatgggccagggcgacaaggaaaccgccgaggcgctgaaggccgaagtcgcgcagctc
aaggaaaccctccccgcgctcgaggcgcaggagaaggaactgagcgccaggctgcaggac
gaactggcgcgcctgcccaacatcccggtcgacgaggttcccgatggcgaggacgagacg
cagaacgtcgaagtcgcgaagtggggcaccccgcgcgaattcgccttcacgcccaaggaa
cacgcggatctcggcccggccctcggcctcgacttcgagaccggcgccctgctatcgggc
gcgcgcttcacgttcctgaagggccagatggcgcgcctgcaccgtgcccttgcccagttc
atgctcgacacgcagaccgccgacaacggctacatggaatgcaatgtcccgctgctggtc
aaggacgatgcagccttcggcaccggtcagcttcccaagttctccgaggacctgttccag
acaaccgatggacgctggctgatccctaccgccgaagtcagcctgaccaacgcggtgcgc
gaacagatcgtcgatgccgaggccctgcccctgcgcatgaccgcgctgaccccctgcttc
cgttccgaggccggggcggcgggccgcgacacgcgcggcttcatccgccagcaccagttc
gagaaggtcgaactcgtcaccgtctgcaagccggaagagagcgaggcggagcacgagcgc
atggtcgcggcagccgaaggcatcctgcaggcgctggaacttccctatcgcaaggtcctg
ctctgcgccggcgacatgggcgccaccgcgcgcaagaccttcgacctcgaagtctggcta
cccgggcagagcgcctaccgcgagatcagctcgatctccaactgtggcgacttccaggcg
cggcgcatgaacgcacgctacaagcccgaaggctccaagaagaccgagttcctgcacacg
ctgaacggctcgggccttgcggtcggccgcactctcgtggccgtactggagaactaccag
caggaagacggttcggtcgcggtgcccgaaaggctcaagccctggatgggcgggatcgag
aagctggaaccgctcgcctga
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