KEGG   Novosphingobium pentaromativorans: JI59_16630
Entry
JI59_16630        CDS       T03399                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K03089  RNA polymerase sigma-32 factor
Organism
npn  Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:npn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:npn03021]
    JI59_16630
Transcription machinery [BR:npn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JI59_16630
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r1_2 CR4_N
Other DBs
NCBI-ProteinID: AIT81287
LinkDB
Position
complement(3418950..3419861)
AA seq 303 aa
MNVSNNERNLPAVPTLGGEQSLNRYMSEIRKFPVLSAEQEYMLAKRYKEHEDPEAAAQLV
TSHLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIKASIQ
EFILRSWSLVKMGTTAAQKKLFFNLRRMKKNLDAYEDTDLHPDDVAKIATTLGVSETEVV
NMNRRMMMGGDASLNVSLREEGEGQWMDILADDRPLQDETVADAEEASVRHDMLVEAMDS
LNDRERDILTERRLTDDPKTLEELSQVYHVSRERVRQIEVRAFEKLQKAMNRIAGEKRLM
PAT
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacgtgagcaacaacgaacgcaatctcccggctgtgccgactctcggcggtgagcag
agcctcaaccgctacatgagcgagattcgcaagttcccggtgctttcggccgagcaggaa
tacatgctcgcgaagcgctacaaggaacatgaggatccggaggctgcagcacaactggta
accagccacctgcgactcgtcgcgaagatcgcgatgggctaccgcggctatggactgccc
gtttcggagctgatttccgaggggaatatcggcctgatgcagggcgtgaagaaattcgaa
cccgatcggggcttccgcctcgcgacttacgcgatgtggtggatcaaggcctcgatccag
gagttcatcctgcgctcgtggagcctcgtgaagatgggcaccaccgccgcgcagaagaag
ctgttcttcaacctgcgccgcatgaagaagaacctcgacgcctacgaggataccgacctg
cacccggacgacgtcgccaagatcgcgacgacgctgggcgtgtcggaaaccgaagtcgtc
aacatgaaccggcgcatgatgatgggcggcgatgcctcgctcaacgtgtcgctgcgcgag
gaaggcgaaggccagtggatggacatcctcgcggatgaccgcccgctgcaggacgaaacc
gttgccgacgccgaggaagcctccgtccgccacgacatgctggtcgaggcgatggactcg
ctcaacgaccgcgaacgcgacattcttaccgaacgtcgcctgacggacgatcccaagacg
ctcgaggaactgagccaggtctatcacgtcagccgcgagcgcgtgcgccagatcgaggtg
cgcgccttcgaaaagctgcagaaggcgatgaaccgcatcgctggcgaaaagcgcctgatg
ccggccacctga

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