Novosphingobium pentaromativorans: JI59_18000
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Entry
JI59_18000 CDS
T03399
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npn03000
]
JI59_18000
Transcription factors [BR:
npn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JI59_18000
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_24
HTH_31
HTH_7
HTH_23
MarR_2
HTH_Crp_2
HTH_3
HTH_38
HTH_Tnp_ISL3
HTH_17
HTH_36
MerR
Motif
Other DBs
NCBI-ProteinID:
AIT81528
UniProt:
G6E7U8
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All DBs
Position
complement(3720154..3721170)
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AA seq
338 aa
AA seq
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MHIPASRITINDIARLSGVSKKTISRVINQSPLVSEETRTKVEAIIAETGFVPNAQARAL
ARGRNPLIALVHDGSDRGILEAVERGMLRGMEGSEFSLVLRPVQGDPLTRLRSFIDQHRP
TGIVLLPPLSESEDLAQLCDETETRCVRLGRVRGEHGLACDDRSAMSGLVAWLIRLGHRR
IGLISGPETSLTAQQRELGYLDAMADHDLDRGPALIAAGDNSFESGMEAGRLLLEVSPRP
TAIIACNDEMAAGVLQTAQLSGLMVPDAISVVGFDDTPLATKIWPAMTSMRIPWAAMAQE
AVSRIRAPAIDAVDAPELKADLVIRNSVLPLEDQAGAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcacattccggcctcccgcatcacgatcaacgatatcgcccgtctctcaggcgtttcg
aaaaagacgatcagccgcgtcatcaaccagtccccgctggtgagcgaggaaacccgcacc
aaggtcgaggcaatcatcgccgagacgggtttcgtgcccaacgcgcaggcgcgggcgctg
gcccgggggcgcaacccgctgatcgcccttgtccacgacggctcggatcgcggcatcctc
gaagcggtcgaacgcggaatgctgcgcggcatggagggcagcgagttctcgctggtgctg
cgtccggtccaaggcgatccgctcacccgcctgcgcagcttcatcgaccagcaccgcccc
accgggatcgtcctgctgccgcccctgtccgagagcgaggaccttgcccagctgtgtgac
gagaccgaaacgcgctgcgtgcgcctcggccgcgtgcgcggggaacatggccttgcctgc
gatgaccgttcggccatgtccgggctggtcgcgtggctcatccggctgggacataggcgc
atcggcctgatcagcggcccggaaacctcgctgaccgcgcagcagcgcgaactgggctat
ctcgacgcgatggccgaccatgacctcgatcgcggccccgcgctcatcgccgcgggcgac
aattcctttgaatccgggatggaggcaggccgcctgctgctggaggtcagcccgcgcccc
accgccatcattgcctgcaatgacgagatggctgccggcgtcctccagactgcccagctt
tccggcctcatggtaccggatgcgatttcggtggtgggttttgacgatacgccgctggcc
acgaagatctggccggcgatgacgtcgatgcgcatcccctgggcagccatggcgcaggaa
gcggtctctcgcattcgcgccccggctatagacgcagtggatgcaccggagctcaaggcg
gacctggtcattcgcaactcggtgctcccgctcgaggatcaagcgggagcatcctga
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