Novosphingobium pentaromativorans: JI59_18880
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Entry
JI59_18880 CDS
T03399
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn03030
DNA replication
npn03430
Mismatch repair
npn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI59_18880
03430 Mismatch repair
JI59_18880
03440 Homologous recombination
JI59_18880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_18880
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_18880
Enzymes [BR:
npn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI59_18880
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI59_18880
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI59_18880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_30
Cdc6_lid
AAA_24
AAA_assoc_2
AAA_19
AAA_14
Glyco_tranf_2_5
DUF815
PIF1
AAA_18
RCF1-5-like_lid
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AIT81677
LinkDB
All DBs
Position
3854814..3856781
Genome browser
AA seq
655 aa
AA seq
DB search
MDDSRDMFGDAPPWQDEEEEETPASAAELEAAGQASMFGDPEPAPPTAPPATDAADPGPQ
AESPALFEAVAEPEAAPELAPAPEPAAPEPKAEAPIAAPKPASANPPAGTSAQPYRVLAR
KYRPQTFDELIGQEAMVQTLANAIKRDRLAHAFLMTGVRGVGKTSTARLIAKALNCIGPD
GQGGPTINPCGRCEPCVAIAEGRHIDVIEMDAASHTGVDDVREIIEAVRYAAVSARYKIY
IIDEVHMLSRNAFNALLKTLEEPPAHVKFLFATTEVDKLPVTVLSRCQRFDLRRIPTPML
AEHFANVCGKEGVEAEEEALSMVAAAAEGSVRDGLSILDQAIAHADLDGEGQVRAEKVRD
MLGLSDKSVQRKLLSAILDGDGAALLELIARQFSLGIEPIAMMRGLMDLTHRVAVAQVAG
EVVDAHAAEEREAIEGWAKALKAGQVHRLWQLMLKGHDEVKSAPDPLVAAQMALLRIMHA
SDMPDPGALVRKLEEIAARAPAAAPAGEGGPSAGGPAAHATAPAAIAPRWEALVDDVEHM
GELSVANTMRMQVRVVELGAGLLRYSQPPGFSEDIAGLMRGALSKATGERWQVEKVDGQG
APTIVEIAETQQAAEGEAVRNAPLVAATMAAFPGAELIQDDRPAAIGGGGRQWRR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcacgcgacatgttcggcgatgcgcccccctggcaggatgaggaagaggag
gagactcccgcctcggcagccgagttggaagcggccgggcaagcctccatgttcggtgat
cccgaaccggcaccgcccacagcgccgccagcgaccgacgctgcagacccgggcccccaa
gccgaatcgccggcgttgttcgaggcggttgcggaacccgaagctgcaccagaacttgcg
cctgcaccggaacccgccgcccccgagccgaaagctgaagcacccatagcggctcccaag
ccagcttcggcgaaccctcctgccgggacttcggcccagccctatcgcgtgctcgcccgc
aagtaccgtccgcagactttcgacgaactgatcgggcaggaggcgatggtgcagaccctc
gccaatgcgatcaagcgcgaccggctggcccatgccttcctgatgaccggcgtgcgcggt
gtcggcaagacgtcgaccgcgcgcctcatcgccaaggcgctgaactgcataggtcccgac
gggcagggcggcccgacgatcaatccttgcggccggtgcgaaccgtgcgttgccattgcc
gaagggcgccatatcgacgtgatcgagatggacgcggcttcgcataccggcgtcgacgac
gtgcgcgagatcatcgaggcagtgcgctacgccgccgtttccgcgcgctacaagatctac
atcatcgacgaagtccacatgttgtcgcgcaatgcattcaatgccttgctcaagacgctt
gaggagccgccggcccacgtgaagttcctcttcgcgaccaccgaagtggacaagctgccg
gtcacggttctctcgcgctgccagcggttcgacttgcggcgcatcccgacgccgatgctt
gcagagcatttcgccaatgtctgcggcaaggaaggcgtggaggccgaggaggaagcgctc
tcgatggtggccgcggccgccgaagggtcggtgcgcgacggcttgtccattctcgaccag
gccatcgcccatgccgatctcgacggcgaggggcaggtgcgggccgagaaagtccgcgac
atgctgggcctttccgacaagtcggttcagcgcaagttgctgagcgcgatcctcgacggt
gacggcgcggccctcctggaactgatcgcgaggcaattctcgctcgggatcgagccgatt
gcgatgatgcgcggcctcatggacctcacgcatcgcgtcgccgtcgcgcaagtggccggc
gaagtggtcgatgcgcatgcggcggaggaacgagaagcgatcgagggctgggccaaggcg
ctcaaggccggacaggttcatcgcctctggcagctcatgctcaaggggcatgacgaagtg
aagtccgcccccgatccgctggtggctgcgcagatggcgctgctgcggatcatgcatgct
tctgatatgcccgatccgggcgcgctggtgcgcaagctggaagagatcgcggcgcgggcg
cccgcggcggcgcctgctggtgaaggcggaccgagcgcaggcggaccggccgcgcatgca
acggctcctgccgccatcgcgccgcgctgggaagcgttggtcgacgatgtcgagcacatg
ggcgagctctcggttgcaaacaccatgcgcatgcaggtccgcgttgtcgaactgggtgca
gggctcctgcgctattcgcagccgcccggcttcagcgaggacatcgccggtctcatgcgc
ggcgcactctcgaaggcgaccggcgagcgctggcaggtcgagaaagtggatgggcagggc
gcgccgacgatcgtcgagatagccgagacgcagcaggcagccgaaggcgaggccgtgcgc
aatgcgccgctcgtggccgctacgatggcagcctttcccggagccgaattgatacaggat
gaccgcccggccgcaattggcggcggcggtcgacagtggagacgttga
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