Novosphingobium pentaromativorans: JI59_20875
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Entry
JI59_20875 CDS
T03399
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npn03000
]
JI59_20875
Transcription factors [BR:
npn03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JI59_20875
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AIT82005
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Position
pLA3:309874..311028
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AA seq
384 aa
AA seq
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MEIWSLNLRHLRAVAKIAELGTVNAAAAAVNLSQPAITQALSRLEAMLGLPLFERRHDGM
IPTRAGDVLAPRIITALAHIQSPHVTMSRLRALLALAETGSYAGAGQETGLSLPSIHRAV
NDLALALRRPLVVRRGKFVITTEAGNQLAREFRLARVELEAGLSEVEALRGYETRRIAIG
AMPLSRARVLPAAVARFLSRRPQVKLTIVEGSRAELVEPLRNGSLDVIVGALRDPLIEED
LVQRPLFDDAPAIFARKGHPLGEGIPTLAQMANYPFCLAPRGTPLRDSFERYFTENGQAL
PEVPVESGSALMIRQVMMNSDFLALLSPDQMQVEVQAGWVRELARLPHGYERTIGMTTRA
SLRPTEVQAEFFADLQAASTEIAE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatggagtctcaaccttcggcacttgcgggccgtggcgaaaatcgcggaactc
gggaccgtgaatgcggccgcggccgctgtaaatctcagtcagcccgcaataacacaggcg
ttgagtcgtctcgaggccatgcttggcctgccgctgttcgagcgccggcacgacgggatg
attccgactcgtgccggagatgtcctagcgccgcgcataattaccgcgctcgcccatatc
cagagcccgcacgtgacgatgtcgcgactgcgcgccttgctcgcgctggccgagaccgga
agctatgccggcgcagggcaggagaccggcctgtcgctgccgtcgatacaccgcgcggtg
aacgatctggcgctggcgctgcgccgaccgctggtggtgcgacggggcaagttcgtcatt
acgaccgaagcgggcaaccagctcgcccgtgaattccggctcgcccgggtcgagctggag
gctggcctgtccgaagtggaggcgcttcggggatatgagacgcggcggatcgcgatcggc
gccatgccgctgtcgcgggcgcgcgttctgccggcggccgtggcgcggttcctctcacgt
cgtccgcaggtcaagctcacgattgtcgagggctcgcgcgctgagctggtcgagccgctg
cgcaatggttcgctggatgtcatcgtcggtgccttgcgtgatccgctgatcgaggaagac
ctcgtccagcgcccactgttcgacgatgcgccggccatttttgcgcgaaaggggcatcct
ctcggcgagggcatccccacgttggcccagatggcaaactatcccttctgcctcgctccg
cgcggtacaccgctgcgcgacagtttcgagcgctactttaccgagaatgggcaggcgctt
cccgaagtgcccgtggaatccggatcggcgctgatgatccgccaggtgatgatgaactca
gactttctggccttgctttcgcccgatcagatgcaggtcgaagtgcaggcaggatgggtc
cgcgaactggctcgcttgccgcatggttatgagcgcaccatcggcatgacgacgcgagca
tcgctgcgccccaccgaggtccaggccgagttcttcgcggatctgcaagctgcttcaacg
gaaattgccgagtag
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