Novosphingobium pentaromativorans: JI59_21030
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Entry
JI59_21030 CDS
T03399
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npn02000
]
JI59_21030
Transporters [BR:
npn02000
]
Other transporters
Pores ion channels [TC:
1
]
JI59_21030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AIT82034
LinkDB
All DBs
Position
pLA3:complement(343718..346066)
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AA seq
782 aa
AA seq
DB search
MRRYAIWCSSWACVSAATLALGVWSSPAADAREAARRGIDIAASTLPEAIAELARETRVS
IGTQGALPRLRTRRVRGNYSVGEALSQLLSGSGFVARQVSETAWRIEPAAAIGPAVPPPS
PVSPPPPQPIVVTTTKQPLELLSVPAAVSVVALADEIHGIPTRASATVASQIEGLSLTSL
GPGRNRMFLRGVADSAFSGESQSTVAVVLDEARLTYAAPDPDIRLVDIERVEVLKGPQGS
LYGTGALGGIYRMVSHAPELDRTSLDVTAGTSLVAHGNTGYSGSAVANLPLVGEKAALRL
VGYAAKEPGWIDTGQRNDANWTRVSGARAGLAFIPASDWRLDLTGFGQWLRSSDTRYVNT
PRSYSRDAQSPEPHDNDLIHFAGRLNGTAGSIDVTFASAMTWHDVDNTLDASLGADGFGL
ANPQSLLDKRHFRIWDSELRLRGHLGGVTWLAGISRLVARQRLATSLEDTAGAMETLDDD
RRTSHDNAAYFDATVPVSGTISIDAGARLFRSSIRETRMLQAGPVSRERDKSGVTPSVAL
SWQPDSSSLVYVRYGSAFRQGGSDITSSGSIDTLGSDELASIELGWRQRLSGGGKLDLGA
WFSNWHDLQSDVLEDNGLVETVNAGNARIFGIEGSLELPLGEGWQAEAGGNFTDARLIRN
DLGFELEDRHLPVVPEYTVRAGLRRDFTLGQLNARAKLSLRYVGPARMSFDPDLDRRMGD
LIESDFEVQVSDGIWQVGLNVQNLFADKGDVFAFGNALRYRSMPQFTPQQPTTISLNGSV
HF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgttacgcgatctggtgcagctcatgggcctgcgtctcagcggccacgctggcg
cttggcgtctggagcagcccggcagctgacgcgcgcgaagcggcgcgccgcggcatcgac
atagccgcgagcacgctgcccgaagccattgccgagcttgcccgcgaaacccgggtttcc
atcggtacgcagggtgcactgccccgcctgcgcacaaggcgcgtaaggggaaactattcg
gtcggtgaagcgctctcgcagcttctgtccggaagcggtttcgtcgcaaggcaggtaagc
gagacggcctggcgcatcgaaccggccgccgccatcgggcctgcagtgcccccgcccagt
cctgtttcaccgccgccgccacagcccatcgtcgtcacgaccaccaagcaaccgctggaa
ttgctctcggttcctgccgcggtttcggtggtcgccctagcggacgaaatccacggcatc
cctacccgcgccagcgccacggttgcctcgcagatcgaagggctttcactcacgtcactg
gggccggggcgcaatcgcatgttcctgcgcggcgttgccgacagcgccttcagcggcgaa
agccagtcgacggtggccgtcgtattagacgaagcgcgcctcacttatgctgcgccggac
ccggatatccgcctcgtcgacatcgagcgtgtcgaagtgcttaaggggccgcagggctcg
ctttacgggaccggtgcgctcggcggcatttaccgcatggtgtcccacgctcccgaactc
gatcggaccagcctcgacgttactgcgggaacctcgctcgtggcgcacggcaataccggc
tattcgggctccgccgtggcaaacctgcccctggtgggcgagaaggccgccctgcgcctc
gtcggctatgccgccaaggagcccggctggatcgataccggtcaacgcaacgacgcgaac
tggacgcgcgtgtcgggcgcgcgcgccgggctcgccttcattccggccagcgactggcgt
ctggacctcaccggcttcggccagtggctgcgctcgagcgacacgcgctatgtcaatacc
ccgcgcagctattcacgcgacgcacaatcgcccgagccgcacgacaacgacctcatccac
ttcgctggacggctgaacggcacggccggcagcatcgatgtgacgttcgccagcgccatg
acctggcacgatgtcgacaacacgctcgatgcatcgctcggcgcagatggcttcggcctc
gccaatccgcagagcctgctcgacaagcgccatttccgcatatgggattccgagctgcgc
ctgcgcggtcaccttggcggcgtaacctggcttgcgggcatctcgcgccttgtggcgcgc
cagagactggcgacttcgcttgaagatactgcaggcgccatggagacgctcgacgacgat
cgccggaccagtcacgacaatgccgcttatttcgacgcgactgttccggtatccggcacg
atctcgatcgatgccggggcgcgacttttccgctcgtcgatccgcgagacgcgcatgttg
caggccggccccgtctcgcgtgagcgtgacaagtccggcgtaacgcccagtgtcgctttg
tcctggcagcccgactcgtccagtctcgtctacgtgcgctacggatcggccttcaggcaa
ggcggatcggatattacgtcaagcggcagcatcgacacgctgggcagcgatgaactggcc
tccatcgaactgggctggcgccagcggctgtccggcgggggcaagctcgatctgggcgca
tggttctccaactggcatgacctgcaatccgacgtgctggaggacaatggcctggtcgag
acggtcaatgccggaaacgcccgcatcttcggcatcgaaggcagcctcgaactgccgctg
ggcgaaggctggcaggcagaggccggcggcaatttcaccgatgcgcgcctgatccgcaat
gatctgggtttcgaactggaagacaggcacttgccggtcgttcccgaatataccgtacgc
gccggcctgcgccgcgatttcacactaggacagctgaatgcgcgcgcgaagctgagcctg
cgctatgtcggcccggcccgcatgagcttcgatcctgaccttgaccgcaggatgggcgac
ctgatcgagagcgatttcgaagttcaggtcagcgacggcatctggcaagtgggcctgaac
gtgcagaacctgttcgctgacaagggcgacgtcttcgccttcggcaatgcccttcgctac
cgctccatgccgcaattcactccgcagcagcccacgacgatttccctgaacgggtcggtc
catttctag
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