Novosphingobium pentaromativorans: JI59_22620
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Entry
JI59_22620 CDS
T03399
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K02034
peptide/nickel transport system permease protein
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI59_22620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npn02000
]
JI59_22620
Transporters [BR:
npn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JI59_22620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AIT82303
UniProt:
G6EFZ9
LinkDB
All DBs
Position
pLA3:722198..723022
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AA seq
274 aa
AA seq
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MSGKLTSFLRGLPVSGRIGLALVVFWLVVALVGPWLAPYSVGAFVDQDVFSGISSQFWLG
SDYLGRDVLSRVLWGSRYTVFLALGAAMIAVCIGTSFALLAAIRGGWTDEVISRAMDTFI
SIPSKIFALVLVAAFGSSLSLLLVIAAATYVPGNFRIARALAMNLVALDFVQVARARGEG
SVHIALREVLPNMIHPLLADTGLRFVFVVLLLSGLSFLGLGVQPPHADLGSLVRENISGI
TEGALAIIVPALAIATLTVGANLLIDALKPGGKA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtaaactgacatccttcctgcgcggactgccggtgtccggccgcatcggtctt
gcactcgtcgtcttctggctcgtcgtggctctcgtaggcccgtggctcgcaccctattcg
gtcggcgccttcgttgatcaggacgtcttcagcggaatctcatcgcagttctggctgggc
agcgattacctgggccgagacgttctcagccgcgtcctgtggggttcgcgctataccgtt
ttcctcgcgctgggcgcagcgatgatcgctgtgtgcatcgggacctcgtttgcattgctc
gccgccatccgcgggggctggaccgacgaagtgatctcgcgtgcgatggacaccttcatc
tcgatcccttcgaagatcttcgcgctggtcctcgtcgctgctttcggttcctcgctctca
ctgctgctggtgatcgccgccgccacttacgtgcccggcaattttcgcatcgcgcgggcg
ctggcgatgaacctggtggccctcgacttcgtgcaggtcgcgcgcgcccgcggtgaaggc
tcggtccacattgccctgcgcgaagtgctgccgaacatgatccatcccctgctggccgac
accggcctgcgcttcgtcttcgtcgtcctgctgctgtcgggcctgagcttcctgggcctt
ggcgtccagccgccccatgccgacctcggctcgctggtgcgcgagaacatctcggggatc
accgaaggcgcgctggcgatcattgtccccgcgctggcgatcgccacgctgacagtcggc
gcgaacctgctgatcgatgccctcaagccgggaggcaaggcatga
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