Novosphingobium pentaromativorans: JI59_22635
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Entry
JI59_22635 CDS
T03399
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00250
Alanine, aspartate and glutamate metabolism
npn00310
Lysine degradation
npn00350
Tyrosine metabolism
npn00650
Butanoate metabolism
npn00760
Nicotinate and nicotinamide metabolism
npn01100
Metabolic pathways
npn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JI59_22635 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JI59_22635 (gabD)
00310 Lysine degradation
JI59_22635 (gabD)
00350 Tyrosine metabolism
JI59_22635 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
JI59_22635 (gabD)
Enzymes [BR:
npn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
JI59_22635 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
JI59_22635 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
JI59_22635 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AIT82306
UniProt:
G6EFZ5
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Position
pLA3:725841..727313
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AA seq
490 aa
AA seq
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MLELRDPSLLRQAALISGEWLVADKASGIAVDNPADGSLVGMVPPCGRSETQAAIDAAMA
AWPDWRARTAGERCALVERWHALVLENADDLARIMTAEQGKPLAEAQGEIRYAATFIKWF
AEEGRRVGARNVTSPERDRRILVLTEPVGPSAIITPWNFPAAMITRKCAPALAAGCPVII
KPSEFTPFSALAMAELALRAGIPAGLIHVLTGMPQEIGETFAASPDVRKLSFTGSTRVGS
LLMRQCADTIKRISLELGGNAPLIVFEDADLDLAVKAAMVSKFRNSGQTCVCANRIFVQS
SVHDEFAARLSAAVSALHAAPGFEAGATVGPLINAAAVTKVSEHVADALDRGGRLVASGS
GREDGNFVRPVVITDAHADMRLASEETFGPVAPLFRFEDEAQAIAMANDTPYGLASYFYT
RDLSRSFRVAEALEAGMVALNTGSIAMEVAPFGGVKASGLGREGGTAGIEEYLETKAFHI
GGLELQEAQA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctgcgcgacccctcgctgctgcgccaggcagcgctcatctccggcgaatgg
ctggtggccgacaaggcgtcgggcatcgctgtcgacaacccggccgacggcagtctcgtg
ggcatggtgcctccctgcggccgctccgagacgcaggccgccatcgatgccgccatggca
gcctggcccgattggcgcgcccgcacggcgggtgaacgctgcgccctggtcgagcgctgg
catgctctcgtcctcgaaaatgccgacgacctggcacggatcatgacagccgagcagggc
aagccgctggccgaagcccagggcgaaattcgctatgcagctaccttcatcaagtggttt
gccgaggaaggccgccgggtcggcgcgcgcaacgtcacatcgccggaacgcgatcgccgc
attctggtgctgaccgagccggtcgggccgagcgccatcatcacgccgtggaacttcccg
gctgcgatgattacccgcaagtgcgcgcctgcgctcgcggccggttgtccggtgatcatc
aagccatccgaattcacacccttcagcgccctggcgatggccgagctggcgctgcgggca
ggcattccggctggattgatccatgtcctgaccggcatgccgcaggaaatcggcgagacc
tttgcggccagcccggacgtgcgaaagctctccttcaccggatcgacccgggtcggatcg
ctgctgatgcgtcaatgcgcagataccatcaagcggataagcctggaactgggcggcaat
gccccgctgatcgtgttcgaggacgccgacctcgaccttgccgtcaaggcggccatggtc
agcaagttccgcaattcgggccagacctgcgtatgcgcgaaccgaattttcgtccaatcg
tccgtgcatgacgaatttgccgcccggctttctgccgccgtgtccgcgctccacgcagcg
cccggtttcgaggccggagcgacagttggtccgttgatcaatgccgctgccgtcaccaag
gtatccgagcacgttgccgatgcgctggatcgcggcgggcgccttgtcgcatcgggcagc
gggcgcgaggacggcaatttcgtgcgcccggtggtcatcaccgatgcccatgccgacatg
cggctggccagcgaggagaccttcgggcccgtcgcgcctctgttccgcttcgaggacgag
gcgcaggccatcgccatggccaacgatacgccctatggcctggcgagctacttctacacc
cgcgacctttcgcgctccttccgtgttgccgaagcgctggaagcaggcatggtggccctc
aataccggttcgatcgccatggaagtggcgcctttcggcggcgtgaaggcatcgggcctc
ggtcgcgaaggcggcacggcgggcatcgaggaatatctggaaaccaaggccttccacatc
ggcgggctggaactgcaagaggcacaggcatga
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