Novosphingobium pentaromativorans: JI59_22750
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Entry
JI59_22750 CDS
T03399
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
npn
Novosphingobium pentaromativorans
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npn03021
]
JI59_22750
Transcription machinery [BR:
npn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JI59_22750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma-like
DUF134
Sigma70_ECF
Xre-like-HTH
HTH_28
HTH_23
HTH_17
HTH_1
HTH_30
HTH_10
GerE
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIT82328
LinkDB
All DBs
Position
pLA3:complement(753520..754044)
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AA seq
174 aa
AA seq
DB search
MAAALAGRQSGFDTLMKLHREAVFRFVYGLTGAESDALDITQESFVAAFLALNRYDRSRP
FRAWILRIARNKCHDWARRRKVRRFFSFAVPIDDAVHIADPQENPEEALSSRLGVERIHE
AIARLPDSLKEPLLLCSLEDMSQDEAAQVLGISRKAVETRIYRARQKLSQMLEG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtggccgctgcgcttgcgggtcgccagagcggtttcgataccctcatgaaattgcaccgc
gaggcggtgtttcgcttcgtgtacggacttaccggcgctgagagcgacgcgctcgacatc
acccaggagagtttcgtcgccgcgttcctcgctctcaaccgctatgatcggtcgcggccg
tttcgcgcatggatcctgcgcattgcgcgcaacaagtgtcatgactgggcccggcggcga
aaagtccgccgcttcttttcctttgcggtgccgatcgacgatgccgtccacattgccgac
ccgcaagagaacccggaagaggccctgtcctcgcgcctgggggtggaacggattcacgag
gcgattgcccgcctgcccgacagcctcaaggaaccgctcctgctttgttcactcgaggac
atgagccaggacgaggccgctcaggtcctcggtatcagccgcaaggccgtggagacgcgc
atctaccgcgccaggcagaaattgtcgcagatgctcgagggataa
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