Nyctereutes procyonoides (raccoon dog): 129493579
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Entry
129493579 CDS
T09008
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03008
Ribosome biogenesis in eukaryotes
npo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129493579 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
129493579 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129493579 (XRN2)
03019 Messenger RNA biogenesis [BR:
npo03019
]
129493579 (XRN2)
03009 Ribosome biogenesis [BR:
npo03009
]
129493579 (XRN2)
03016 Transfer RNA biogenesis [BR:
npo03016
]
129493579 (XRN2)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129493579 (XRN2)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
129493579 (XRN2)
Ribosome biogenesis [BR:
npo03009
]
Eukaryotic type
Pre-60S particles
RNases
129493579 (XRN2)
Transfer RNA biogenesis [BR:
npo03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
129493579 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
129493579
NCBI-ProteinID:
XP_055155860
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPMDVPPELCHGIQG
KFSLDEEAVLPDQIVCSPVPMLRDLTQNAAISINFKDPQFAEDYIFKAVMLPGARKPTPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGAGVYGNAAPPPAA
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtccccgctttctttcggtggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatgccagtaaa
ccaaatccaaatgatgtggagtttgataatctatatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaggatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccgcgtgccaaaatgaaccagcagcgttccaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtggagaagcagcgagtcagggaagaaatactg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgatagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaacttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaaggcaaagagcccagcctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacatgaacccaactttaccatcattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcaatttggacatgaggtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccctgtgcagaaggagaa
tttatcttccttcgtcttaatgttcttcgggagtatttggaaagagagctcactatggcc
agtctaccgttcacgttcgatgttgagaggagtattgatgactgggtcttcatgtgcttc
ttcgtgggaaacgacttccttcctcacctgccatcattagaaattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttctctcctggtggaatattaactcct
catgccttgggttcaagaaattctccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacaagtttc
acttctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggctatgggaagctggttggaagcagcggtac
tacaagaacaaatttgatgttgatgcagctgatgagaaattccgtcgtaaggttgtacag
tcttatgttgaggggctctgctgggtccttcgatactattaccagggctgtgcttcctgg
aagtggtattacccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgccatctgattttgagaagggcaccaaaccatttaaaccattggaacaacttatggga
gtttttccagctgcgagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccttttgtggatgagcgaaggctgcgagct
gctctagaagaggtgtacccagacctcactccagaagagactaaaagaaacagtcttgga
ggtgacgtcttatttgtggggaaacatcacccacttcacgacttcattttagaactctac
cagacaggttccacggagccaatggatgtaccacctgaactatgtcatgggattcaaggg
aagttttcgttggatgaagaagctgttcttccagatcaaatagtatgttctcctgtcccc
atgttacgagatctgacacaaaacgctgcaatcagtattaattttaaggacccacagttt
gctgaagactacatttttaaagctgtaatgcttccaggagcaagaaaaccaacaccagta
ctgaaacctagtgactgggaaaagtccagcaatggacggcagtggaagccccaacttggt
tttaatcgggatcggcggcctgtccacttggatcaggctgcattcaggactttaggccat
gttatgccaagaggctcaggggctggcgtttatggcaacgctgcaccaccacctgcagct
tatcaaggaaacttatacaggccgctgctgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcggggtcctcctccccttttccagcagcaaagg
tttgacagaggcgttggggctgaacctctgctgccatggaaccggatgctccaaacccag
aatgcagccttccagccaaaccaataccagatgctagctggacccggcgggtatccaccc
agacgtgatgatcgtggagggagacagggatatcccagagaaggaaggaaatacccattg
ccaccaccctcaggaagatacagttggaattag
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