Nyctereutes procyonoides (raccoon dog): 129493715
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Entry
129493715 CDS
T09008
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npo03016
]
129493715 (TRUB1)
Enzymes [BR:
npo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
129493715 (TRUB1)
Transfer RNA biogenesis [BR:
npo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129493715 (TRUB1)
Prokaryotic type
129493715 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
129493715
NCBI-ProteinID:
XP_055156133
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MAATEAAVLSSSSLETDSALVPEAAGTPAATAATSPATAAAASVAAAARTGPDARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTGMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKTY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccgaggcggcggtgctatcgtcgtcatctttggaaacagactcggccctg
gtccctgaagctgcaggaacccccgccgcaacggccgccacctccccagcgacggctgca
gccgcgtccgtggcggccgctgccaggaccgggcccgacgccagggtctccaaggccgct
ctggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactttgaaaattggacatggagggacacta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
ggtatgttgtcagggtccaagaggtatattgccattggagaactggggaaagctactgac
acactggactctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttgatgaagagaggcgaagtagta
gaagcaaaacctgccaggcctgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacag
ggaccatttacactagaagagcacgctctgcctgaagacaaatggacaattgatgacatt
gcacagtctctggaacattgctcatctcttctcccagcagaattggcacttaaaaaatca
aaacctgaggaatctaatgaacaagttttgagctgtgaatatataactctcagtgagaca
aagggagaagatgatgtcattaagacatattaa
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integrated database retrieval system
