Nyctereutes procyonoides (raccoon dog): 129494043
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Entry
129494043 CDS
T09008
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04068
FoxO signaling pathway
npo05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
129494043 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
129494043 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npo04121
]
129494043 (RAG1)
Enzymes [BR:
npo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129494043 (RAG1)
Ubiquitin system [BR:
npo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129494043 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
129494043
NCBI-ProteinID:
XP_055156709
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSLEKAPEEAQIEKKVSSEGKPSLE
QSPAVPDKADGQEAALSPPALKAHPKFLKEPHDDGKSRDKAIHQANLRHLCRICGNSLKT
DGRNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFQIDVKADVDSVHPTDFCHKCW
KVMYRRFSSAPRGVCFPRKAAPEWLPHAPSCDLCRAARQGLKRKSPQPNAQLSKRLRTVL
ERPGRARGHRRRARAGLRDSGATRKASDCGNVHLGTELLAVDFPAHFVKSISCRICEHIL
ADPVETTCKHVFCRVCILRRLKATGSHCPCCRYPCFPTDLESPGRSFLSILNSLMVRCPA
KGCDEEVSLERYNQHVAGHKDSDQTFVHINKGGRPRQPLLSLTRRAQKHRLRELKLQVKA
FADREEGGDVKSVCLALFLLALRARNEHRQADELEAVLQGRGPGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRAAEKALLPGHHAFEWQPPLQNVSSSAHVGIIDG
LSGLSPCVDDYPVGTIAKRFRYDAALVSALMDMQEDLLEGMRARGLDDHLGGPFTVVVKE
SCDGMGDVSEKHGGGPAVPEKAVRFSFTVMRITVAQGSESVQVFEEGKPNSELCCKPLCL
MLADEADHETLTAILSPLVAEREAMKSSHLLLEMGGALRTFRFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVLHSITRSHSENLERYEVWRSNPYHESVDELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGQAYSKAGASKEERRRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQRFMNAHNAYKKSGPPFD
SQAGLGDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcacttctgccccagatgagatccagcac
ccacatattaaattttcagaatggaaatttaaactgttcagggtgcggtctcttgaaaag
gcacctgaagaagctcaaatagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccagcagtcccggacaaggctgatggtcaggaggcagccctgagtccaccagca
ttgaaagctcaccccaagtttctgaaggaaccccacgatgatgggaaatcaagagacaaa
gcgatccaccaagccaaccttcgacatctctgccgaatctgtgggaattctttgaaaacc
gacgggcgtaataggaggtatccggtccacgggcccgtggatggcaaaacccaagtcctt
ctacggaagaaggaaaggagggccacatcctggccagacctcattgccaaggttttccag
atcgatgtgaaagcagacgttgactccgtccaccccaccgacttctgccacaagtgctgg
aaggtcatgtacagaaggtttagcagcgccccacgcggggtttgcttcccgaggaaggcg
gccccggagtggctcccccacgcgccctcttgcgacctctgccgcgctgcccgccaggga
ctcaagaggaagagtcctcagccaaatgcacagctcagcaaaaggctcagaaccgtgctt
gagcggccgggcagggcccgtgggcaccggagaagagcccgggccgggctccgcgacagc
ggggcaaccaggaaggcctccgactgcgggaacgtgcaccttggtaccgagctcctggca
gtggacttcccggcccacttcgtgaagtccatctcctgccggatctgtgagcacatcctg
gcggaccccgtggagaccacttgcaagcacgtgttttgcagggtctgcattctccgccgc
ctcaaagccacgggcagccactgtccctgctgccggtatccctgcttccctaccgacctg
gagagcccggggaggtcctttctgagcatcctgaactccctgatggtgagatgtccggcc
aaagggtgcgacgaggaggtcagcttggagaggtacaaccagcacgtggcaggccacaag
gactctgaccagacttttgtgcacatcaacaagggggggcggccgcgccagcccctgctg
tcgctgacccggagggctcagaagcaccgcctgcgggagctcaagctgcaggtcaaggcc
ttcgccgaccgggaggaggggggcgacgtgaagtccgtgtgcctggcgctgttcctgctg
gcgctgcgggccaggaacgagcaccggcaggccgacgagctggaggccgtcctgcagggc
cgcggccccggcctgcagccggccgtctgcctggccatccgcgtcaacaccttcctcagc
tgcagccagtaccacaagatgtaccggaccgtgaaggccatcaccgggaggcagatcttt
cagccgctgcacgccctgcgggccgccgagaaggccctcctgcccggccaccacgccttc
gagtggcagccgcctctgcagaacgtgtcctccagcgcccacgttggcatcatcgacggc
ctgtcgggcctgtccccctgcgtggacgactaccccgtgggcaccatcgccaagcggttc
cgctacgatgcggccctggtgtccgctctgatggacatgcaggaggacctcctggaaggc
atgagggcccggggcctggacgaccacctcgggggcccgttcaccgtggtggtcaaggag
tcctgcgacggcatgggggacgtgagcgagaagcacggcggcggcccggccgtccccgag
aaggccgtgcggttctcgttcacggtcatgaggatcaccgtggcccagggctcggaaagc
gtgcaggtgttcgaggagggcaaaccgaactcggagctgtgctgcaagccgctgtgtctc
atgctggcggacgaggccgaccacgagaccctgacggccatcctgagcccgctggtcgcc
gagagggaggccatgaagagcagccacctcctgctggagatggggggcgcgctgcggacc
ttcaggttcatcttcaggggcaccggatacgacgagaagcttgtccgggaggtcgaaggc
ctcgaggcctcgggctcggtctacatctgcaccctctgcgacgccacccgcctggaagcc
tctcagaacctcgtcctgcactccatcaccaggagccactcggagaacctggagcgctat
gaggtctggcgctccaacccctaccacgagtccgtggacgagctgagggaccgggtcaag
ggcgtctcctcgaagcccttcattgagacggtgccttccatcgatgcgctccactgcgac
atcggcaacgcggccgagttctacaagatcttccagctcgagataggccaggcctacagc
aaggccggcgcgtccaaggaggagcggagaaggtggcaggccacgctggacaagcatctc
cgcaagaagatgaacctgaagcccatcatgaggatgaacggcaacttcgccaggaagctc
atgaccaaagagacggttgaagcagtctgtgaactaatcccctctgaggagaggcacgaa
gccctgagggagctcatggacctttacctgaagatgaagcctgtatggcgatcttcgtgt
cccgcgaaagagtgcccagaatccctgtgccagtacagcttcaactcccagcgtttcgcc
gagctcctgtctaccaagttcaagtatagatacgagggcaaaatcaccaattacttccac
aaaaccctggcccacgtccccgaaattatcgagagagatggttccatcggggcctgggcg
agcgagggcaatgagtctggcaacaaactgtttaggcgcttccggaaaatgaacgccagg
cagtccaagtgctacgagatggaagacgtcctgaaacaccactggctgtacacctccaaa
tacctgcagaggtttatgaatgctcacaatgcgtataaaaagtccggccctcccttcgac
tcacaggcaggcttaggcgatccattaggcctagaggactctctggaaactcaagattcg
atggaattttaa
DBGET
integrated database retrieval system
